Note: Insertion ids mentioned in this report are for internal use (not linked to any database) and will change if the pipeline is re-run.
Note: A “unique” insertion is the merged result after the allele-aware merging from both callers for each patient, and then merged across patients. If we were working with SNPs, a “unique” SNP would be, rs123, for example, defined by its position and alternative(s) allele(s). A unique insertion is defined by its position, length, and inserted sequence.
The analysis has identified:
The stringent criterion (both callers) has left:
177 unique insertions that passed the stringent filtering. (8.1% of the total unique insertions), had at least one occurrence genotyped as 0/0.
These amount to 224 total count (5.4% of filter-passing occurrences).
111 of these unique insertions were genotyped as 0/0 for all their occurrences, amounting to 158 insertion counts.
Of these fully wrong calls, 64 were only found on a single patient each (57.7% of the 111).
The strict criteria missed calls for 60 unique insertions (2.8%).
These mean a total of 60 occurrences, out of 4 185 calls that passed the stringent filter.
60 unique insertions had more false negative occurrences than positive ones.
The discrepancies between genotyping and the lax filtering is also summarized in the table below.
Criterion | Unique INS with false positives (%) | Total false positives (%) | Unique INS (total) with all false positives | Unique INS with false negatives (%) | Total false negatives (Total positives) | Unique INS with more false negatives than positives |
|---|---|---|---|---|---|---|
Strict | 177 | 224 | 111 | 60 | 60 | 60 |
Lax | 343 | 438 | 258 | 0 | 0 | 0 |
The next sections only take into account insertions that passed the strict criterion on at least one sample, and that were not genotyped as 0/0 on all samples.
586 TE insertions were found on all cases in homozygosis.
Position | Length | Type | AF |
|---|---|---|---|
CP068277.2:6 326 450 | 177 | SINE (AluYb8) | 1 |
CP068277.2:16 114 184 | 43 | SINE (Alu) | 1 |
CP068277.2:16 575 488 | 38 | LINE (L1M1) | 1 |
CP068277.2:20 992 773 | 316 | SINE (AluYa5) | 1 |
CP068277.2:38 352 287 | 74 | SINE (FRAM) | 1 |
CP068277.2:45 094 599 | 48 | Retroposon (SVA_F) | 1 |
CP068277.2:45 201 578 | 326 | SINE (AluYb8) | 1 |
CP068277.2:46 119 460 | 48 | Retroposon (SVA_F) | 1 |
CP068277.2:57 484 949 | 211 | SINE (AluYk2) | 1 |
CP068277.2:61 803 773 | 316 | SINE (AluYc) | 1 |
CP068277.2:65 547 882 | 309 | SINE (AluY) | 1 |
CP068277.2:76 472 686 | 280 | SINE (AluYa5) | 1 |
CP068277.2:78 954 901 | 307 | SINE (AluYb9) | 1 |
CP068277.2:79 721 146 | 38 | LTR (THE1D-int) | 1 |
CP068277.2:80 225 123 | 320 | SINE (AluYa5) | 1 |
CP068277.2:86 116 050 | 715 | LINE (L1HS) | 1 |
CP068277.2:99 356 767 | 110 | Retroposon (SVA_A) | 1 |
CP068277.2:112 237 049 | 55 | LINE (L1HS) | 1 |
CP068277.2:112 786 134 | 225 | Retroposon (SVA_F) | 1 |
CP068277.2:112 911 196 | 48 | Retroposon (SVA_F) | 1 |
CP068277.2:114 512 654 | 311 | SINE (AluYa5) | 1 |
CP068277.2:117 439 865 | 79 | Retroposon (SVA_F) | 1 |
CP068277.2:158 899 112 | 27 | LINE (L1P) | 1 |
CP068277.2:178 395 729 | 46 | Retroposon (SVA_F) | 1 |
CP068277.2:188 371 799 | 328 | SINE (AluYb8) | 1 |
CP068277.2:189 038 638 | 67 | LTR (MSTA) | 1 |
CP068277.2:192 243 097 | 40 | LTR (LTR12D) | 1 |
CP068277.2:203 274 785 | 87 | LTR (MSTA) | 1 |
CP068277.2:203 533 894 | 317 | SINE (AluYg6) | 1 |
CP068277.2:210 459 290 | 89 | SINE (AluJb) | 1 |
CP068277.2:210 706 521 | 195 | Retroposon (SVA_E) | 1 |
CP068277.2:214 109 436 | 50 | Retroposon (SVA_F) | 1 |
CP068277.2:217 069 272 | 325 | SINE (AluYa5) | 1 |
CP068277.2:221 722 389 | 173 | Retroposon (SVA_A) | 1 |
CP068277.2:221 931 096 | 328 | SINE (AluYb8) | 1 |
CP068277.2:225 302 830 | 99 | Retroposon (SVA_F) | 1 |
CP068277.2:239 055 414 | 282 | LINE (L1P1) | 1 |
CP068277.2:241 802 064 | 38 | SINE (Alu) | 1 |
CP068276.2:1 468 423 | 331 | SINE (AluY) | 1 |
CP068276.2:7 902 007 | 54 | LTR (HERVH-int) | 1 |
CP068276.2:10 932 617 | 343 | Retroposon (SVA_E) | 1 |
CP068276.2:13 196 975 | 46 | LTR (HERVH-int) | 1 |
CP068276.2:13 955 731 | 74 | LTR (MER57-int) | 1 |
CP068276.2:44 604 010 | 317 | SINE (AluYa5) | 1 |
CP068276.2:46 682 545 | 49 | SINE (Alu) | 1 |
CP068276.2:50 018 018 | 133 | SINE (AluSc8) | 1 |
CP068276.2:54 440 636 | 319 | SINE (AluY) | 1 |
CP068276.2:54 460 543 | 253 | SINE (AluY) | 1 |
CP068276.2:64 083 532 | 30 | LTR (LTR7B) | 1 |
CP068276.2:64 261 146 | 63 | LTR (HERVH-int) | 1 |
CP068276.2:70 930 166 | 31 | SINE (Alu) | 1 |
CP068276.2:78 743 214 | 314 | SINE (AluYa5) | 1 |
CP068276.2:99 438 516 | 46 | LINE (L1P1) | 1 |
CP068276.2:102 198 725 | 316 | SINE (AluYa5) | 1 |
CP068276.2:123 008 476 | 317 | SINE (AluYa5) | 1 |
CP068276.2:123 569 366 | 134 | SINE (AluSp) | 1 |
CP068276.2:123 667 376 | 329 | SINE (AluYb8) | 1 |
CP068276.2:123 849 426 | 327 | LINE (L1MD) | 1 |
CP068276.2:128 316 576 | 322 | SINE (AluY) | 1 |
CP068276.2:141 752 388 | 57 | LINE (L1M2) | 1 |
CP068276.2:143 122 440 | 327 | SINE (AluY) | 1 |
CP068276.2:144 249 299 | 151 | SINE (AluSp) | 1 |
CP068276.2:145 037 173 | 324 | SINE (AluYb8) | 1 |
CP068276.2:158 030 254 | 326 | SINE (AluYb9) | 1 |
CP068276.2:159 759 795 | 324 | SINE (AluYa5) | 1 |
CP068276.2:169 505 778 | 318 | SINE (AluYb8) | 1 |
CP068276.2:170 052 507 | 48 | Retroposon (SVA_F) | 1 |
CP068276.2:173 773 579 | 313 | SINE (AluYa5) | 1 |
CP068276.2:174 714 647 | 320 | SINE (AluY) | 1 |
CP068276.2:177 936 293 | 332 | SINE (AluYb8) | 1 |
CP068276.2:177 969 024 | 339 | SINE (AluYb8) | 1 |
CP068276.2:188 126 192 | 73 | Retroposon (SVA_A) | 1 |
CP068276.2:191 887 362 | 478 | Retroposon (SVA_E) | 1 |
CP068276.2:192 183 560 | 313 | SINE (AluYa5) | 1 |
CP068276.2:192 186 024 | 319 | SINE (AluYa5) | 1 |
CP068276.2:192 230 647 | 48 | Retroposon (SVA_F) | 1 |
CP068276.2:194 169 722 | 48 | Retroposon (SVA_F) | 1 |
CP068276.2:196 356 056 | 274 | SINE (AluYa5) | 1 |
CP068276.2:197 233 937 | 329 | SINE (AluYb8) | 1 |
CP068276.2:200 963 887 | 44 | SINE (FRAM) | 1 |
CP068276.2:201 256 725 | 968 | LINE (L1HS) | 1 |
CP068276.2:207 594 378 | 322 | SINE (AluYb8) | 1 |
CP068276.2:208 081 694 | 315 | SINE (AluY) | 1 |
CP068276.2:209 066 826 | 324 | SINE (AluYb9) | 1 |
CP068276.2:215 319 684 | 77 | Retroposon (SVA_F) | 1 |
CP068276.2:215 369 783 | 158 | SINE (AluYb9) | 1 |
CP068276.2:216 174 633 | 133 | SINE (AluJo) | 1 |
CP068276.2:223 302 437 | 127 | Retroposon (SVA_F) | 1 |
CP068276.2:226 634 805 | 245 | SINE (AluYa5) | 1 |
CP068276.2:233 687 447 | 149 | SINE (AluSg) | 1 |
CP068276.2:234 212 774 | 50 | Retroposon (SVA_F) | 1 |
CP068276.2:235 675 687 | 327 | SINE (AluYb8) | 1 |
CP068275.2:2 584 962 | 312 | SINE (AluYa5) | 1 |
CP068275.2:20 459 977 | 66 | LTR (LTR25-int) | 1 |
CP068275.2:28 800 764 | 330 | SINE (AluY) | 1 |
CP068275.2:29 581 534 | 322 | SINE (AluYb8) | 1 |
CP068275.2:32 005 645 | 94 | LTR (LTR65) | 1 |
CP068275.2:38 085 680 | 299 | Retroposon (SVA_F) | 1 |
CP068275.2:38 119 250 | 134 | SINE (AluJb) | 1 |
CP068275.2:50 054 724 | 268 | SINE (AluYa5) | 1 |
CP068275.2:50 341 806 | 97 | Retroposon (SVA_F) | 1 |
CP068275.2:50 833 539 | 39 | Retroposon (SVA_C) | 1 |
CP068275.2:50 871 694 | 344 | SINE (AluYb8) | 1 |
CP068275.2:65 941 603 | 35 | LINE (L1PA6) | 1 |
CP068275.2:80 303 273 | 45 | LINE (L1PREC2) | 1 |
CP068275.2:83 763 966 | 254 | LINE (L1PA8A) | 1 |
CP068275.2:96 460 083 | 73 | Retroposon (SVA_A) | 1 |
CP068275.2:101 102 912 | 79 | LINE (L1P4) | 1 |
CP068275.2:104 176 252 | 323 | SINE (AluYb8) | 1 |
CP068275.2:104 197 720 | 134 | SINE (AluJb) | 1 |
CP068275.2:114 228 328 | 335 | SINE (AluY) | 1 |
CP068275.2:114 926 706 | 49 | LINE (L1P3) | 1 |
CP068275.2:125 499 397 | 48 | Retroposon (SVA_F) | 1 |
CP068275.2:125 500 129 | 36 | Retroposon (SVA_D) | 1 |
CP068275.2:127 413 483 | 316 | SINE (AluYa5) | 1 |
CP068275.2:128 621 623 | 187 | LTR (LTR16A1) | 1 |
CP068275.2:132 084 525 | 48 | Retroposon (SVA_F) | 1 |
CP068275.2:132 210 422 | 310 | SINE (AluYb8) | 1 |
CP068275.2:136 876 079 | 57 | LINE (L1MCa) | 1 |
CP068275.2:143 907 036 | 50 | LINE (L1PA12) | 1 |
CP068275.2:145 833 710 | 401 | Retroposon (SVA_E) | 1 |
CP068275.2:147 504 053 | 77 | LTR (LTR12D) | 1 |
CP068275.2:148 281 506 | 322 | SINE (AluY) | 1 |
CP068275.2:150 907 914 | 41 | LTR (HERVH-int) | 1 |
CP068275.2:174 782 744 | 118 | LTR (LTR12C) | 1 |
CP068275.2:175 468 147 | 318 | SINE (AluYa5) | 1 |
CP068275.2:189 692 114 | 77 | Retroposon (SVA_F) | 1 |
CP068275.2:192 214 801 | 326 | SINE (AluYa5) | 1 |
CP068275.2:193 768 251 | 318 | SINE (AluY) | 1 |
CP068275.2:200 460 370 | 71 | SINE (AluJb) | 1 |
CP068274.2:2 568 818 | 317 | SINE (AluYa5) | 1 |
CP068274.2:4 004 477 | 80 | LTR (HERVH-int) | 1 |
CP068274.2:4 038 891 | 319 | SINE (AluYb9) | 1 |
CP068274.2:4 318 468 | 65 | LTR (LTR12_v) | 1 |
CP068274.2:9 950 436 | 248 | SINE (AluY) | 1 |
CP068274.2:9 954 701 | 316 | SINE (AluYi6) | 1 |
CP068274.2:15 773 375 | 496 | Retroposon (SVA_F) | 1 |
CP068274.2:16 374 994 | 121 | Retroposon (SVA_D) | 1 |
CP068274.2:34 499 227 | 331 | SINE (AluYa5) | 1 |
CP068274.2:36 292 569 | 314 | SINE (AluYb8) | 1 |
CP068274.2:39 378 562 | 322 | SINE (AluYb8) | 1 |
CP068274.2:39 675 502 | 162 | SINE (AluSx) | 1 |
CP068274.2:56 743 512 | 36 | Retroposon (SVA_B) | 1 |
CP068274.2:57 814 201 | 147 | Retroposon (SVA_A) | 1 |
CP068274.2:58 620 850 | 323 | SINE (AluYb8) | 1 |
CP068274.2:60 123 691 | 124 | SINE (AluYb8) | 1 |
CP068274.2:61 601 364 | 101 | SINE (AluYa5) | 1 |
CP068274.2:73 097 163 | 175 | Retroposon (SVA_A) | 1 |
CP068274.2:73 581 961 | 183 | LINE (L1PA2) | 1 |
CP068274.2:75 446 974 | 318 | SINE (AluYa5) | 1 |
CP068274.2:85 038 637 | 318 | SINE (AluYa5) | 1 |
CP068274.2:85 588 188 | 304 | SINE (AluY) | 1 |
CP068274.2:88 878 813 | 314 | SINE (AluY) | 1 |
CP068274.2:99 966 112 | 319 | SINE (AluYb9) | 1 |
CP068274.2:106 156 930 | 45 | SINE (AluSz6) | 1 |
CP068274.2:108 421 359 | 48 | Retroposon (SVA_F) | 1 |
CP068274.2:109 710 152 | 64 | LINE (L1M4c) | 1 |
CP068274.2:111 379 802 | 39 | Retroposon (SVA_A) | 1 |
CP068274.2:113 652 393 | 31 | LINE (L1P4) | 1 |
CP068274.2:125 038 429 | 37 | LTR (MLT1A1) | 1 |
CP068274.2:137 536 644 | 412 | LTR (HERVL40-int) | 1 |
CP068274.2:138 329 412 | 314 | SINE (AluY) | 1 |
CP068274.2:139 713 216 | 57 | SINE (AluSp) | 1 |
CP068274.2:143 337 477 | 151 | SINE (AluYa5) | 1 |
CP068274.2:153 984 112 | 98 | Retroposon (SVA_F) | 1 |
CP068274.2:154 329 485 | 41 | SINE (Alu) | 1 |
CP068274.2:154 538 668 | 126 | Retroposon (SVA_F) | 1 |
CP068274.2:154 686 326 | 82 | SINE (AluYc) | 1 |
CP068274.2:168 367 484 | 123 | Retroposon (SVA_F) | 1 |
CP068274.2:168 367 837 | 39 | Retroposon (SVA_C) | 1 |
CP068274.2:168 615 609 | 326 | SINE (AluYa5) | 1 |
CP068274.2:171 244 192 | 111 | LTR (MER4A) | 1 |
CP068274.2:176 462 509 | 319 | SINE (AluYi6) | 1 |
CP068274.2:176 567 723 | 316 | SINE (AluY) | 1 |
CP068274.2:177 952 805 | 327 | SINE (AluY) | 1 |
CP068274.2:182 677 404 | 315 | SINE (AluYi6) | 1 |
CP068274.2:186 157 092 | 181 | LTR (HERVH-int) | 1 |
CP068274.2:186 384 582 | 39 | Retroposon (SVA_C) | 1 |
CP068274.2:189 838 124 | 54 | SINE (AluJb) | 1 |
CP068273.2:12 123 869 | 302 | SINE (AluYa5) | 1 |
CP068273.2:12 256 876 | 29 | LINE (L1PA14) | 1 |
CP068273.2:13 792 771 | 314 | SINE (AluYa5) | 1 |
CP068273.2:24 017 957 | 286 | SINE (AluY) | 1 |
CP068273.2:25 758 140 | 221 | LINE (L1P1) | 1 |
CP068273.2:27 677 538 | 122 | SINE (AluJb) | 1 |
CP068273.2:29 034 806 | 73 | Retroposon (SVA_A) | 1 |
CP068273.2:38 033 738 | 92 | LTR (Harlequin-int) | 1 |
CP068273.2:40 437 907 | 307 | SINE (AluYa5) | 1 |
CP068273.2:43 233 657 | 86 | Retroposon (SVA_F) | 1 |
CP068273.2:46 415 440 | 334 | SINE (AluY) | 1 |
CP068273.2:66 799 023 | 345 | Retroposon (SVA_F) | 1 |
CP068273.2:77 294 343 | 50 | Retroposon (SVA_F) | 1 |
CP068273.2:77 456 269 | 295 | SINE (AluYd8) | 1 |
CP068273.2:92 669 299 | 337 | SINE (AluYa5) | 1 |
CP068273.2:100 778 993 | 312 | SINE (AluYb8) | 1 |
CP068273.2:103 260 600 | 40 | LTR (LTR12E) | 1 |
CP068273.2:104 621 581 | 46 | SINE (Alu) | 1 |
CP068273.2:108 350 701 | 102 | LINE (L1M5) | 1 |
CP068273.2:109 193 523 | 311 | SINE (AluYa5) | 1 |
CP068273.2:111 960 940 | 186 | SINE (AluYc) | 1 |
CP068273.2:116 441 257 | 27 | LTR (LTR10F) | 1 |
CP068273.2:118 013 084 | 305 | SINE (AluY) | 1 |
CP068273.2:121 495 295 | 313 | SINE (AluYa5) | 1 |
CP068273.2:125 544 797 | 317 | SINE (AluYk2) | 1 |
CP068273.2:138 669 937 | 65 | LTR (LTR12) | 1 |
CP068273.2:139 924 858 | 295 | SINE (AluSx) | 1 |
CP068273.2:141 287 230 | 91 | SINE (FLAM_C) | 1 |
CP068273.2:155 191 230 | 317 | SINE (AluYb8) | 1 |
CP068273.2:156 028 237 | 117 | LINE (L1HS) | 1 |
CP068273.2:160 223 574 | 316 | SINE (AluYg6) | 1 |
CP068273.2:161 633 327 | 329 | SINE (AluYb8) | 1 |
CP068273.2:180 746 045 | 174 | SINE (AluY) | 1 |
CP068273.2:181 314 056 | 267 | LINE (L1P1) | 1 |
CP068272.2:5 704 809 | 325 | Retroposon (SVA_F) | 1 |
CP068272.2:7 310 938 | 81 | LTR (LTR12D) | 1 |
CP068272.2:10 902 109 | 134 | SINE (AluSz) | 1 |
CP068272.2:21 225 613 | 62 | SINE (AluYb8) | 1 |
CP068272.2:23 848 830 | 322 | SINE (AluY) | 1 |
CP068272.2:26 622 355 | 332 | SINE (AluY) | 1 |
CP068272.2:28 094 492 | 330 | SINE (AluYb8) | 1 |
CP068272.2:30 339 365 | 39 | Retroposon (SVA_D) | 1 |
CP068272.2:32 628 076 | 315 | SINE (AluYa5) | 1 |
CP068272.2:36 183 676 | 101 | LTR (LTR12C) | 1 |
CP068272.2:36 767 743 | 98 | Retroposon (SVA_F) | 1 |
CP068272.2:38 355 201 | 136 | LTR (MER11A) | 1 |
CP068272.2:38 788 666 | 48 | Retroposon (SVA_F) | 1 |
CP068272.2:42 430 462 | 160 | SINE (AluSg4) | 1 |
CP068272.2:43 757 249 | 317 | SINE (AluYa5) | 1 |
CP068272.2:45 835 182 | 326 | SINE (AluY) | 1 |
CP068272.2:53 623 893 | 313 | SINE (AluYa5) | 1 |
CP068272.2:62 724 632 | 133 | SINE (AluSp) | 1 |
CP068272.2:68 954 952 | 318 | SINE (AluYa5) | 1 |
CP068272.2:86 651 703 | 331 | SINE (AluY) | 1 |
CP068272.2:103 468 739 | 127 | LTR (HERVH-int) | 1 |
CP068272.2:105 078 139 | 324 | SINE (AluY) | 1 |
CP068272.2:109 131 038 | 272 | Retroposon (SVA_A) | 1 |
CP068272.2:115 951 898 | 105 | SINE (AluSc) | 1 |
CP068272.2:123 028 920 | 103 | LINE (L2a) | 1 |
CP068272.2:126 080 528 | 40 | LTR (LTR12C) | 1 |
CP068272.2:142 199 746 | 131 | LTR (LTR12) | 1 |
CP068272.2:159 090 611 | 39 | LTR (LTR8) | 1 |
CP068272.2:167 189 769 | 54 | DNA (Tigger3c) | 1 |
CP068271.2:2 382 174 | 77 | Retroposon (SVA_F) | 1 |
CP068271.2:12 396 185 | 31 | SINE (AluSg) | 1 |
CP068271.2:15 262 062 | 60 | LTR (MER89) | 1 |
CP068271.2:23 776 953 | 125 | Retroposon (SVA_F) | 1 |
CP068271.2:29 929 681 | 37 | LTR (HERVH-int) | 1 |
CP068271.2:38 447 505 | 50 | LTR (LTR1) | 1 |
CP068271.2:38 626 104 | 322 | SINE (AluYa5) | 1 |
CP068271.2:38 630 323 | 333 | SINE (AluYb8) | 1 |
CP068271.2:45 083 204 | 325 | SINE (AluYb8) | 1 |
CP068271.2:48 018 075 | 322 | SINE (AluYa5) | 1 |
CP068271.2:52 864 846 | 336 | LINE (L1MCa) | 1 |
CP068271.2:52 883 012 | 354 | LINE (L1HS) | 1 |
CP068271.2:56 334 427 | 323 | SINE (AluYb8) | 1 |
CP068271.2:56 369 757 | 300 | SINE (AluYa5) | 1 |
CP068271.2:68 364 737 | 319 | SINE (AluYb8) | 1 |
CP068271.2:75 037 069 | 48 | Retroposon (SVA_F) | 1 |
CP068271.2:78 216 802 | 318 | SINE (AluYa5) | 1 |
CP068271.2:82 300 766 | 294 | SINE (AluYb8) | 1 |
CP068271.2:84 473 621 | 314 | SINE (AluYb8) | 1 |
CP068271.2:84 568 344 | 317 | SINE (AluYg6) | 1 |
CP068271.2:85 121 772 | 186 | SINE (AluYc) | 1 |
CP068271.2:85 626 331 | 317 | SINE (AluY) | 1 |
CP068271.2:91 992 921 | 206 | Retroposon (SVA_F) | 1 |
CP068271.2:103 838 055 | 128 | SINE (AluJb) | 1 |
CP068271.2:110 968 119 | 328 | SINE (AluYb8) | 1 |
CP068271.2:115 628 405 | 310 | SINE (AluYa5) | 1 |
CP068271.2:119 569 637 | 300 | SINE (AluYa5) | 1 |
CP068271.2:119 758 768 | 317 | SINE (AluYe5) | 1 |
CP068271.2:121 741 949 | 31 | SINE (Alu) | 1 |
CP068271.2:122 631 790 | 80 | LTR (HERVH-int) | 1 |
CP068271.2:125 458 018 | 281 | SINE (AluYk2) | 1 |
CP068271.2:126 339 965 | 167 | LTR (THE1-int) | 1 |
CP068271.2:129 881 314 | 242 | SINE (AluYa5) | 1 |
CP068271.2:130 830 383 | 318 | SINE (AluSx) | 1 |
CP068271.2:136 812 007 | 329 | SINE (AluYa5) | 1 |
CP068271.2:146 522 789 | 32 | LINE (L1P1) | 1 |
CP068271.2:149 923 454 | 135 | SINE (AluSz) | 1 |
CP068271.2:150 461 892 | 48 | Retroposon (SVA_F) | 1 |
CP068271.2:153 713 300 | 130 | SINE (AluSx) | 1 |
CP068271.2:158 746 778 | 338 | SINE (AluYb8) | 1 |
CP068270.2:1 867 928 | 45 | SINE (Alu) | 1 |
CP068270.2:9 270 409 | 319 | SINE (AluYa5) | 1 |
CP068270.2:17 372 585 | 320 | SINE (AluYk3) | 1 |
CP068270.2:34 580 253 | 67 | LINE (L1M3) | 1 |
CP068270.2:40 175 476 | 60 | LINE (L1MA3) | 1 |
CP068270.2:40 184 959 | 324 | SINE (AluYa5) | 1 |
CP068270.2:41 686 987 | 332 | SINE (AluYb8) | 1 |
CP068270.2:51 522 000 | 311 | SINE (AluYa5) | 1 |
CP068270.2:51 532 733 | 48 | Retroposon (SVA_F) | 1 |
CP068270.2:51 604 354 | 118 | LTR (LTR12C) | 1 |
CP068270.2:54 436 680 | 313 | SINE (AluYb8) | 1 |
CP068270.2:60 716 533 | 316 | SINE (AluYa5) | 1 |
CP068270.2:88 868 126 | 317 | SINE (AluYa5) | 1 |
CP068270.2:89 463 045 | 96 | DNA (MER53) | 1 |
CP068270.2:90 822 117 | 48 | Retroposon (SVA_F) | 1 |
CP068270.2:93 464 949 | 163 | LINE (L1PB2) | 1 |
CP068270.2:96 503 803 | 231 | SINE (AluJb) | 1 |
CP068270.2:98 966 642 | 40 | Retroposon (SVA_D) | 1 |
CP068270.2:107 844 447 | 325 | SINE (AluYb8) | 1 |
CP068270.2:128 153 263 | 325 | SINE (AluYb8) | 1 |
CP068270.2:128 443 757 | 46 | Retroposon (SVA_F) | 1 |
CP068270.2:129 246 518 | 77 | Retroposon (SVA_F) | 1 |
CP068270.2:132 464 747 | 322 | SINE (AluYa5) | 1 |
CP068270.2:137 820 678 | 330 | SINE (AluYb8) | 1 |
CP068269.2:1 717 408 | 72 | SINE (AluSc) | 1 |
CP068269.2:6 795 504 | 39 | Retroposon (SVA_D) | 1 |
CP068269.2:7 855 153 | 326 | SINE (AluYb9) | 1 |
CP068269.2:22 072 341 | 76 | SINE (AluSg4) | 1 |
CP068269.2:30 020 771 | 69 | LINE (L1M3) | 1 |
CP068269.2:30 361 586 | 314 | SINE (AluY) | 1 |
CP068269.2:31 255 451 | 209 | LTR (MER34B-int) | 1 |
CP068269.2:32 923 481 | 65 | LTR (LTR12) | 1 |
CP068269.2:33 442 084 | 37 | Retroposon (SVA_F) | 1 |
CP068269.2:34 156 745 | 66 | Retroposon (SVA_F) | 1 |
CP068269.2:34 293 360 | 332 | SINE (AluSp) | 1 |
CP068269.2:35 940 130 | 31 | SINE (Alu) | 1 |
CP068269.2:38 265 890 | 78 | Retroposon (SVA_A) | 1 |
CP068269.2:41 137 102 | 322 | SINE (AluYa5) | 1 |
CP068269.2:81 331 129 | 317 | SINE (AluYa5) | 1 |
CP068269.2:84 265 383 | 48 | SINE (Alu) | 1 |
CP068269.2:88 666 159 | 315 | SINE (AluYb8) | 1 |
CP068269.2:96 285 775 | 31 | SINE (Alu) | 1 |
CP068269.2:97 437 226 | 307 | SINE (AluY) | 1 |
CP068269.2:104 997 511 | 137 | Retroposon (SVA_F) | 1 |
CP068269.2:104 997 678 | 139 | Retroposon (SVA_F) | 1 |
CP068269.2:105 092 050 | 53 | SINE (AluSx4) | 1 |
CP068269.2:109 968 532 | 39 | Retroposon (SVA_F) | 1 |
CP068269.2:112 443 781 | 81 | SINE (AluSz) | 1 |
CP068269.2:119 632 661 | 61 | SINE (AluYa5) | 1 |
CP068269.2:119 842 404 | 313 | SINE (AluYk2) | 1 |
CP068269.2:121 668 497 | 307 | SINE (AluYa5) | 1 |
CP068269.2:138 384 259 | 298 | LINE (L1M4) | 1 |
CP068269.2:138 516 231 | 39 | SINE (AluSp) | 1 |
CP068268.2:3 057 186 | 34 | SINE (AluYh3) | 1 |
CP068268.2:3 530 702 | 315 | SINE (AluYg6) | 1 |
CP068268.2:14 455 848 | 327 | SINE (AluYa5) | 1 |
CP068268.2:19 127 408 | 330 | SINE (AluY) | 1 |
CP068268.2:21 756 234 | 34 | SINE (AluJb) | 1 |
CP068268.2:23 506 880 | 330 | SINE (AluYb8) | 1 |
CP068268.2:26 090 723 | 315 | SINE (AluY) | 1 |
CP068268.2:26 098 120 | 45 | SINE (Alu) | 1 |
CP068268.2:27 385 781 | 391 | LINE (L1PA7) | 1 |
CP068268.2:29 201 484 | 188 | LTR (MLT1F-int) | 1 |
CP068268.2:30 638 183 | 126 | SINE (AluSx) | 1 |
CP068268.2:46 272 906 | 39 | Retroposon (SVA_C) | 1 |
CP068268.2:52 951 752 | 275 | SINE (AluYk2) | 1 |
CP068268.2:70 106 724 | 315 | SINE (AluYb8) | 1 |
CP068268.2:71 500 997 | 80 | Retroposon (SVA_A) | 1 |
CP068268.2:72 746 653 | 48 | Retroposon (SVA_F) | 1 |
CP068268.2:80 805 468 | 154 | SINE (AluYk2) | 1 |
CP068268.2:88 539 556 | 142 | SINE (AluYa5) | 1 |
CP068268.2:97 658 629 | 311 | SINE (AluYa5) | 1 |
CP068268.2:97 822 182 | 48 | Retroposon (SVA_F) | 1 |
CP068268.2:102 861 010 | 320 | SINE (AluYa5) | 1 |
CP068268.2:102 921 189 | 141 | Retroposon (SVA_F) | 1 |
CP068268.2:107 018 352 | 142 | SINE (AluJb) | 1 |
CP068268.2:108 118 466 | 320 | SINE (AluYa5) | 1 |
CP068268.2:115 681 774 | 49 | Retroposon (SVA_F) | 1 |
CP068268.2:116 480 342 | 28 | LINE (L1P1) | 1 |
CP068268.2:120 078 060 | 39 | Retroposon (SVA_C) | 1 |
CP068268.2:131 025 575 | 97 | LINE (L1PA7) | 1 |
CP068267.2:4 244 313 | 47 | LINE (L1M2) | 1 |
CP068267.2:4 348 569 | 156 | Retroposon (SVA_B) | 1 |
CP068267.2:8 949 899 | 318 | SINE (AluYk2) | 1 |
CP068267.2:22 361 771 | 124 | LINE (L1PA16) | 1 |
CP068267.2:22 533 230 | 115 | LINE (L1M2) | 1 |
CP068267.2:23 457 692 | 313 | SINE (AluYa5) | 1 |
CP068267.2:25 682 675 | 345 | SINE (AluYa5) | 1 |
CP068267.2:27 776 457 | 331 | LTR (MER61E) | 1 |
CP068267.2:31 266 980 | 316 | SINE (AluYb8) | 1 |
CP068267.2:47 253 984 | 175 | Retroposon (SVA_F) | 1 |
CP068267.2:48 903 168 | 348 | LINE (L1HS) | 1 |
CP068267.2:55 491 270 | 337 | SINE (AluY) | 1 |
CP068267.2:56 473 791 | 316 | SINE (AluYg6) | 1 |
CP068267.2:57 894 100 | 117 | Retroposon (SVA_B) | 1 |
CP068267.2:57 956 966 | 131 | SINE (AluYa5) | 1 |
CP068267.2:58 403 047 | 326 | SINE (AluYb8) | 1 |
CP068267.2:75 339 542 | 77 | Retroposon (SVA_F) | 1 |
CP068267.2:79 061 406 | 55 | LTR (ERVL-B4-int) | 1 |
CP068267.2:80 466 705 | 125 | LTR (LTR12D) | 1 |
CP068267.2:82 117 603 | 40 | Retroposon (SVA_C) | 1 |
CP068267.2:83 069 825 | 39 | Retroposon (SVA_B) | 1 |
CP068267.2:95 142 638 | 41 | SINE (Alu) | 1 |
CP068267.2:96 505 968 | 312 | SINE (AluYk3) | 1 |
CP068267.2:96 512 808 | 42 | LTR (LTR46) | 1 |
CP068267.2:110 116 232 | 326 | SINE (AluY) | 1 |
CP068267.2:118 715 549 | 133 | SINE (AluSx) | 1 |
CP068267.2:130 127 238 | 452 | Retroposon (SVA_E) | 1 |
CP068266.2:3 101 640 | 128 | Retroposon (SVA_F) | 1 |
CP068266.2:6 807 792 | 255 | SINE (AluYk2) | 1 |
CP068266.2:8 198 775 | 48 | Retroposon (SVA_F) | 1 |
CP068266.2:8 608 368 | 115 | Retroposon (SVA_A) | 1 |
CP068266.2:8 608 846 | 47 | Retroposon (SVA_F) | 1 |
CP068266.2:25 181 210 | 328 | SINE (AluY) | 1 |
CP068266.2:29 284 322 | 34 | LINE (L1P1) | 1 |
CP068266.2:30 029 848 | 200 | SINE (AluYa5) | 1 |
CP068266.2:30 090 243 | 425 | DNA (Tigger3b) | 1 |
CP068266.2:38 940 562 | 338 | LINE (L1P1) | 1 |
CP068266.2:41 239 964 | 344 | LINE (L1P3) | 1 |
CP068266.2:41 631 622 | 38 | LINE (L1P1) | 1 |
CP068266.2:43 644 100 | 126 | Retroposon (SVA_F) | 1 |
CP068266.2:44 984 370 | 310 | SINE (AluYa5) | 1 |
CP068266.2:48 293 796 | 97 | Retroposon (SVA_F) | 1 |
CP068266.2:48 294 127 | 36 | Retroposon (SVA_F) | 1 |
CP068266.2:54 455 313 | 39 | Retroposon (SVA_D) | 1 |
CP068266.2:57 624 597 | 41 | LTR (LTR12C) | 1 |
CP068266.2:57 657 848 | 313 | SINE (AluYa5) | 1 |
CP068266.2:58 805 540 | 321 | SINE (AluYb8) | 1 |
CP068266.2:60 632 641 | 282 | SINE (AluYb8) | 1 |
CP068266.2:70 181 568 | 46 | Retroposon (SVA_F) | 1 |
CP068266.2:71 354 899 | 23 | LTR (LTR12E) | 1 |
CP068266.2:77 071 800 | 174 | LINE (L1P1) | 1 |
CP068266.2:86 830 416 | 145 | SINE (AluSx) | 1 |
CP068266.2:87 458 390 | 319 | SINE (AluY) | 1 |
CP068266.2:93 946 035 | 316 | SINE (AluY) | 1 |
CP068266.2:94 256 702 | 320 | SINE (AluYa5) | 1 |
CP068266.2:96 952 164 | 313 | SINE (AluYa5) | 1 |
CP068266.2:97 074 951 | 330 | SINE (AluYb8) | 1 |
CP068266.2:101 881 504 | 101 | SINE (AluYb8) | 1 |
CP068266.2:104 285 274 | 50 | Retroposon (SVA_F) | 1 |
CP068266.2:104 884 820 | 187 | SINE (AluYb9) | 1 |
CP068266.2:121 990 164 | 462 | Retroposon (SVA_F) | 1 |
CP068266.2:124 855 294 | 309 | SINE (AluJb) | 1 |
CP068266.2:126 723 341 | 319 | SINE (AluYb8) | 1 |
CP068266.2:129 049 321 | 78 | LTR (LTR1C3) | 1 |
CP068265.2:13 715 682 | 197 | SINE (AluYb8) | 1 |
CP068265.2:17 820 623 | 288 | SINE (AluYb8) | 1 |
CP068265.2:19 743 748 | 50 | LTR (LTR3B_v) | 1 |
CP068265.2:20 808 668 | 316 | SINE (AluYa5) | 1 |
CP068265.2:21 153 369 | 313 | SINE (AluYa5) | 1 |
CP068265.2:24 474 413 | 135 | SINE (AluYa5) | 1 |
CP068265.2:28 214 233 | 66 | LTR (LTR12) | 1 |
CP068265.2:29 823 844 | 319 | SINE (AluYa5) | 1 |
CP068265.2:36 827 231 | 337 | SINE (AluYb9) | 1 |
CP068265.2:45 778 723 | 328 | SINE (AluYa5) | 1 |
CP068265.2:49 104 639 | 47 | LINE (L1PA10) | 1 |
CP068265.2:51 294 855 | 39 | Retroposon (SVA_A) | 1 |
CP068265.2:56 231 795 | 119 | SINE (AluY) | 1 |
CP068265.2:57 263 121 | 290 | SINE (AluYb9) | 1 |
CP068265.2:59 936 546 | 390 | LINE (L1HS) | 1 |
CP068265.2:62 171 725 | 328 | SINE (AluYa5) | 1 |
CP068265.2:68 684 135 | 328 | SINE (AluYa5) | 1 |
CP068265.2:77 302 799 | 313 | SINE (AluYa5) | 1 |
CP068265.2:81 838 300 | 307 | SINE (AluYa5) | 1 |
CP068265.2:85 705 616 | 305 | SINE (AluYa5) | 1 |
CP068265.2:85 943 033 | 291 | SINE (AluYa5) | 1 |
CP068265.2:88 073 850 | 315 | SINE (AluYa5) | 1 |
CP068265.2:93 800 756 | 144 | SINE (AluYa5) | 1 |
CP068265.2:98 181 349 | 135 | SINE (AluYk2) | 1 |
CP068265.2:107 293 494 | 316 | SINE (AluYb8) | 1 |
CP068265.2:109 388 985 | 315 | SINE (AluYb8) | 1 |
CP068265.2:109 862 682 | 128 | LTR (LTR12C) | 1 |
CP068265.2:109 863 304 | 40 | LTR (LTR12E) | 1 |
CP068265.2:110 705 076 | 70 | SINE (Alu) | 1 |
CP068264.2:4 080 751 | 328 | SINE (AluYb8) | 1 |
CP068264.2:4 176 442 | 306 | SINE (AluYa5) | 1 |
CP068264.2:8 666 687 | 179 | SINE (AluYb8) | 1 |
CP068264.2:8 922 130 | 78 | LINE (L1P1) | 1 |
CP068264.2:9 347 163 | 85 | LINE (L1P1) | 1 |
CP068264.2:17 906 483 | 330 | SINE (AluY) | 1 |
CP068264.2:22 030 072 | 439 | LINE (L1HS) | 1 |
CP068264.2:24 287 282 | 97 | LINE (L1M1) | 1 |
CP068264.2:28 277 165 | 36 | Retroposon (SVA_D) | 1 |
CP068264.2:28 610 960 | 298 | SINE (AluYa5) | 1 |
CP068264.2:28 682 029 | 316 | SINE (AluY) | 1 |
CP068264.2:29 128 780 | 87 | SINE (AluJo) | 1 |
CP068264.2:29 131 238 | 312 | SINE (AluY) | 1 |
CP068264.2:31 745 103 | 39 | Retroposon (SVA_C) | 1 |
CP068264.2:37 792 967 | 513 | LINE (L1P1) | 1 |
CP068264.2:38 736 235 | 310 | SINE (AluYa5) | 1 |
CP068264.2:45 171 772 | 326 | SINE (AluYb8) | 1 |
CP068264.2:67 754 433 | 185 | SINE (AluYe5) | 1 |
CP068264.2:76 765 409 | 281 | SINE (AluYa5) | 1 |
CP068264.2:80 383 842 | 314 | SINE (AluY) | 1 |
CP068264.2:92 910 435 | 53 | SINE (Alu) | 1 |
CP068263.2:18 206 744 | 28 | DNA (Tigger3c) | 1 |
CP068263.2:20 376 616 | 44 | SINE (Alu) | 1 |
CP068263.2:21 696 325 | 308 | SINE (AluYa5) | 1 |
CP068263.2:33 461 719 | 125 | Retroposon (SVA_F) | 1 |
CP068263.2:38 489 396 | 36 | Retroposon (SVA_F) | 1 |
CP068263.2:64 197 247 | 323 | SINE (AluYb9) | 1 |
CP068263.2:65 174 494 | 318 | SINE (AluYa5) | 1 |
CP068263.2:67 062 769 | 57 | SINE (Alu) | 1 |
CP068263.2:77 681 654 | 287 | SINE (AluSx) | 1 |
CP068263.2:80 969 475 | 321 | SINE (AluYa5) | 1 |
CP068263.2:83 433 722 | 325 | SINE (AluYk2) | 1 |
CP068263.2:93 349 076 | 291 | SINE (AluYa5) | 1 |
CP068262.2:480 325 | 310 | SINE (AluSx) | 1 |
CP068262.2:832 869 | 330 | SINE (AluY) | 1 |
CP068262.2:3 038 242 | 110 | SINE (AluSx3) | 1 |
CP068262.2:4 839 788 | 41 | SINE (Alu) | 1 |
CP068262.2:5 324 682 | 319 | SINE (AluYa5) | 1 |
CP068262.2:15 116 749 | 85 | SINE (AluSc) | 1 |
CP068262.2:31 491 932 | 465 | Retroposon (SVA_F) | 1 |
CP068262.2:62 994 200 | 43 | SINE (AluJb) | 1 |
CP068262.2:63 015 018 | 318 | SINE (AluYa5) | 1 |
CP068262.2:64 052 598 | 321 | SINE (AluYa5) | 1 |
CP068262.2:64 555 274 | 134 | SINE (AluSz) | 1 |
CP068262.2:64 559 334 | 56 | SINE (AluSx3) | 1 |
CP068262.2:68 772 351 | 63 | LTR (HERVH-int) | 1 |
CP068262.2:88 229 528 | 36 | DNA (Tigger3c) | 1 |
CP068261.2:4 300 934 | 259 | LINE (L1HS) | 1 |
CP068261.2:16 232 917 | 317 | SINE (AluYe5) | 1 |
CP068261.2:36 143 032 | 46 | Retroposon (SVA_F) | 1 |
CP068261.2:38 008 692 | 192 | SINE (AluYc) | 1 |
CP068261.2:47 114 918 | 39 | Retroposon (SVA_D) | 1 |
CP068261.2:47 115 270 | 39 | Retroposon (SVA_C) | 1 |
CP068261.2:49 989 179 | 224 | Retroposon (SVA_F) | 1 |
CP068261.2:53 188 839 | 321 | SINE (AluYa5) | 1 |
CP068261.2:53 829 064 | 311 | SINE (AluYa5) | 1 |
CP068261.2:61 421 223 | 48 | Retroposon (SVA_F) | 1 |
CP068261.2:68 170 924 | 159 | LTR (LTR12C) | 1 |
CP068261.2:73 573 179 | 318 | SINE (AluYa5) | 1 |
CP068261.2:75 907 696 | 47 | SINE (AluJr4) | 1 |
CP068261.2:75 935 935 | 316 | SINE (AluYb8) | 1 |
CP068261.2:78 886 239 | 313 | SINE (AluYg6) | 1 |
CP068260.2:3 032 121 | 146 | SINE (AluYe5) | 1 |
CP068260.2:8 797 339 | 112 | SINE (AluJo) | 1 |
CP068260.2:9 045 402 | 41 | LTR (HERVIP10F-int) | 1 |
CP068260.2:9 097 966 | 101 | LTR (LTR12C) | 1 |
CP068260.2:9 388 660 | 334 | SINE (AluJb) | 1 |
CP068260.2:14 173 524 | 36 | Retroposon (SVA_F) | 1 |
CP068260.2:22 276 125 | 316 | SINE (AluYb8) | 1 |
CP068260.2:35 273 621 | 317 | SINE (AluYa5) | 1 |
CP068260.2:45 956 220 | 80 | SINE (AluSq) | 1 |
CP068260.2:53 996 308 | 73 | LINE (L1PBa) | 1 |
CP068260.2:54 439 434 | 167 | LINE (L1HS) | 1 |
CP068260.2:57 843 464 | 383 | LTR (LTR12C) | 1 |
CP068260.2:61 819 865 | 232 | SINE (AluYa5) | 1 |
CP068260.2:63 221 681 | 321 | SINE (AluY) | 1 |
CP068260.2:66 072 639 | 338 | SINE (AluYa5) | 1 |
CP068260.2:68 770 940 | 323 | SINE (AluYb9) | 1 |
CP068260.2:77 079 849 | 311 | SINE (AluYk2) | 1 |
CP068259.2:646 264 | 72 | SINE (AluSp) | 1 |
CP068259.2:6 913 159 | 323 | SINE (AluYb8) | 1 |
CP068259.2:12 746 120 | 175 | Retroposon (SVA_F) | 1 |
CP068259.2:13 829 910 | 126 | Retroposon (SVA_F) | 1 |
CP068259.2:16 391 116 | 140 | SINE (AluJb) | 1 |
CP068259.2:17 856 398 | 164 | SINE (AluSx4) | 1 |
CP068259.2:18 265 771 | 319 | SINE (AluSx) | 1 |
CP068259.2:23 988 183 | 49 | Retroposon (SVA_F) | 1 |
CP068259.2:24 393 776 | 69 | LTR (MER11B) | 1 |
CP068259.2:36 653 353 | 143 | Retroposon (SVA_F) | 1 |
CP068259.2:40 925 916 | 77 | Retroposon (SVA_F) | 1 |
CP068259.2:53 674 286 | 100 | SINE (AluJb) | 1 |
CP068259.2:54 049 533 | 135 | SINE (AluSx) | 1 |
CP068259.2:56 390 789 | 85 | SINE (AluYa5) | 1 |
CP068259.2:56 876 654 | 35 | SINE (Alu) | 1 |
CP068259.2:59 694 584 | 318 | SINE (AluYb8) | 1 |
CP068258.2:996 590 | 102 | LINE (L2a) | 1 |
CP068258.2:3 049 605 | 47 | Retroposon (SVA_F) | 1 |
CP068258.2:5 079 951 | 283 | SINE (AluY) | 1 |
CP068258.2:5 422 563 | 49 | LTR (MSTB) | 1 |
CP068258.2:5 544 074 | 305 | SINE (AluYc) | 1 |
CP068258.2:5 544 134 | 290 | SINE (AluYc) | 1 |
CP068258.2:37 925 585 | 291 | SINE (AluSx) | 1 |
CP068258.2:52 135 817 | 36 | SINE (Alu) | 1 |
CP068258.2:53 725 240 | 316 | SINE (AluYa5) | 1 |
CP068258.2:62 091 491 | 125 | SINE (AluSc) | 1 |
CP068258.2:63 187 710 | 320 | SINE (AluYb8) | 1 |
CP068257.2:22 749 626 | 325 | SINE (AluYb8) | 1 |
CP068257.2:42 828 950 | 134 | SINE (AluSz) | 1 |
CP068256.2:18 235 398 | 357 | SINE (AluYb8) | 1 |
CP068256.2:31 488 198 | 334 | SINE (AluY) | 1 |
CP068256.2:32 276 538 | 316 | SINE (AluY) | 1 |
CP068256.2:32 611 946 | 99 | LTR (MER11C) | 1 |
CP068255.2:295 081 | 165 | SINE (AluSx) | 1 |
CP068255.2:3 778 904 | 57 | LINE (L1PB1) | 1 |
CP068255.2:14 286 653 | 46 | DNA (MER5B) | 1 |
CP068255.2:24 293 369 | 129 | Retroposon (SVA_F) | 1 |
CP068255.2:25 517 581 | 334 | SINE (AluYb8) | 1 |
CP068255.2:27 034 647 | 90 | LTR (MER61C) | 1 |
CP068255.2:28 925 984 | 49 | Retroposon (SVA_F) | 1 |
CP068255.2:45 683 112 | 125 | Retroposon (SVA_F) | 1 |
CP068255.2:52 216 963 | 324 | SINE (AluYb8) | 1 |
CP068255.2:83 656 505 | 86 | LINE (L1MC5) | 1 |
CP068255.2:89 731 271 | 242 | SINE (AluYa5) | 1 |
CP068255.2:135 308 659 | 303 | Retroposon (SVA_F) | 1 |
CP068255.2:135 308 739 | 304 | Retroposon (SVA_F) | 1 |
CP068255.2:136 580 332 | 51 | LTR (LTR7) | 1 |
CP068255.2:151 099 729 | 315 | SINE (AluY) | 1 |
CP086569.2:306 952 | 165 | SINE (AluSx) | 1 |
CP086569.2:736 248 | 133 | SINE (AluJb) | 1 |
CP086569.2:1 168 077 | 333 | SINE (AluSx) | 1 |
Allele frequency is shown for insertions for each chromosome. Each dot marks a different insertion.
This is the classification of TEs by class (I or II), family (e.g., SINE), subfamily (e.g., Alu) and name (e.g., AluY). SVA, Alu and L1 elements have their own table on the Class I section.
Repeat | Repeat | Unique | Total | Total |
|---|---|---|---|---|
DNA | hAT | 6 | 12 | 10 |
TcMar | 6 | 12 | 11 | |
LINE | L1 | 101 | 200 | 199 |
L2 | 3 | 6 | 6 | |
LTR | ERV1 | 31 | 59 | 58 |
ERVK | 5 | 8 | 8 | |
ERVL | 10 | 20 | 20 | |
Retroposon | SVA | 127 | 246 | 234 |
SINE | Alu | 787 | 1 570 | 1 566 |
MIR | 1 | 2 | 2 | |
Total | - | 1 077 | 2 135 | 2 114 |
Name | Unique | Total | Total |
|---|---|---|---|
SVA A | 12 | 24 | 20 |
SVA B | 2 | 4 | 4 |
SVA C | 4 | 7 | 7 |
SVA D | 4 | 8 | 8 |
SVA E | 17 | 33 | 33 |
SVA F | 86 | 166 | 158 |
SVA F1 | 2 | 4 | 4 |
Total | 127 | 246 | 234 |
Name | Unique | Total | Total |
|---|---|---|---|
Alu | 2 | 4 | 4 |
AluJb | 16 | 31 | 31 |
AluJo | 4 | 8 | 7 |
AluJr4 | 1 | 2 | 2 |
AluSc | 3 | 6 | 6 |
AluSc8 | 3 | 6 | 6 |
AluSg | 10 | 20 | 20 |
AluSg4 | 2 | 4 | 3 |
AluSp | 5 | 10 | 10 |
AluSq | 4 | 8 | 8 |
AluSx | 33 | 65 | 65 |
AluSx3 | 3 | 6 | 6 |
AluSx4 | 3 | 6 | 6 |
AluSz | 5 | 10 | 9 |
AluSz6 | 3 | 6 | 6 |
AluY | 152 | 303 | 302 |
AluYa5 | 253 | 505 | 505 |
AluYa8 | 7 | 14 | 14 |
AluYb8 | 146 | 292 | 292 |
AluYb9 | 24 | 48 | 48 |
AluYc | 14 | 28 | 28 |
AluYd8 | 3 | 6 | 6 |
AluYe5 | 20 | 40 | 40 |
AluYf1 | 1 | 2 | 2 |
AluYg6 | 16 | 32 | 32 |
AluYh7 | 4 | 8 | 8 |
AluYi6 | 4 | 8 | 8 |
AluYj4 | 2 | 4 | 4 |
AluYk11 | 3 | 6 | 6 |
AluYk12 | 3 | 6 | 6 |
AluYk2 | 28 | 56 | 56 |
AluYk3 | 5 | 10 | 10 |
AluYk4 | 1 | 2 | 2 |
FLAM C | 2 | 4 | 4 |
FRAM | 2 | 4 | 4 |
Total | 787 | 1 570 | 1 566 |
Name | Unique | Total | Total |
|---|---|---|---|
L1HS | 51 | 101 | 100 |
L1M | 1 | 2 | 2 |
L1M2 | 3 | 6 | 6 |
L1M3 | 1 | 2 | 2 |
L1M3b | 1 | 2 | 2 |
L1M4 | 1 | 2 | 2 |
L1M5 | 2 | 3 | 3 |
L1MA5 | 1 | 2 | 2 |
L1MA7 | 1 | 2 | 2 |
L1MB8 | 1 | 2 | 2 |
L1MC | 2 | 4 | 4 |
L1MC3 | 1 | 2 | 2 |
L1MC4 | 1 | 2 | 2 |
L1MC5 | 1 | 2 | 2 |
L1MEc | 1 | 2 | 2 |
L1P1 | 5 | 10 | 10 |
L1P2 | 2 | 4 | 4 |
L1P3 | 4 | 8 | 8 |
L1P3b | 1 | 2 | 2 |
L1P4 | 1 | 2 | 2 |
L1PA10 | 1 | 2 | 2 |
L1PA11 | 1 | 2 | 2 |
L1PA12 | 1 | 2 | 2 |
L1PA13 | 1 | 2 | 2 |
L1PA16 | 2 | 4 | 4 |
L1PA2 | 4 | 8 | 8 |
L1PA3 | 1 | 2 | 2 |
L1PA7 | 1 | 2 | 2 |
L1PB | 2 | 4 | 4 |
L1PB1 | 1 | 2 | 2 |
L1PBa | 1 | 2 | 2 |
L1PBa1 | 2 | 4 | 4 |
L1PBb | 1 | 2 | 2 |
Total | 101 | 200 | 199 |
Position | Length | Type | Gene | Annotation | Occurrences |
|---|---|---|---|---|---|
CP068255.2:5 749 733 | 113 | SINE (Alu) | NLGN4X | Intron | 2 |
CP068255.2:7 494 814 | 158 | SINE (Alu) | LOC107985675 | Intron | 2 |
CP068255.2:9 615 362 | 270 | SINE (Alu) | WWC3 | Intron | 2 |
CP068255.2:18 657 080 | 54 | SINE (Alu) | ADGRG2 | Intron | 2 |
CP068255.2:22 237 816 | 314 | SINE (Alu) | PTCHD1-AS | Intron | 2 |
CP068255.2:24 293 369 | 129 | Retroposon (SVA) | POLA1 | Intron | 2 |
CP068255.2:28 925 984 | 49 | Retroposon (SVA) | IL1RAPL1 | Intron | 2 |
CP068255.2:32 788 943 | 323 | SINE (Alu) | DMD | Intron | 2 |
CP068255.2:39 481 305 | 337 | SINE (Alu) | BCOR | Intron | 2 |
CP068255.2:83 656 505 | 86 | LINE (L1) | SATL1 | Intron | 2 |
CP068255.2:83 683 173 | 323 | SINE (Alu) | ZNF711 | Intron | 2 |
CP068255.2:84 713 986 | 317 | SINE (Alu) | DACH2 | Intron | 2 |
CP068255.2:90 623 038 | 135 | SINE (Alu) | PCDH11X | Intron | 2 |
CP068255.2:97 133 746 | 70 | LINE (L1) | LINC03077 | Intron | 2 |
CP068255.2:100 344 903 | 51 | LINE (L1) | ZMAT1 | Intron | 2 |
CP068255.2:102 352 991 | 329 | SINE (Alu) | TMSB15B-AS1 | Intron | 2 |
CP068255.2:103 670 854 | 148 | LTR (ERV1) | IL1RAPL2 | Intron | 2 |
CP068255.2:110 764 583 | 6 057 | LINE (L1) | RTL4 | Intron | 2 |
CP068255.2:130 112 151 | 310 | SINE (Alu) | FIRRE | Intron | 2 |
CP068255.2:151 099 729 | 315 | SINE (Alu) | NSDHL | Intron | 2 |
CP068255.2:247 908 | 165 | SINE (Alu) | LOC102724521 | Intron | 1 |
CP068255.2:295 081 | 165 | SINE (Alu) | LOC102724521 | Intron | 2 |
CP068256.2:7 583 739 | 317 | SINE (Alu) | LOC128966699 | Promoter | 2 |
CP068256.2:18 235 398 | 357 | SINE (Alu) | SLC25A18 | Intron | 2 |
CP068256.2:18 700 162 | 324 | SINE (Alu) | LINC01634 | Promoter | 2 |
CP068256.2:24 409 922 | 308 | SINE (Alu) | GSTT4 | Intron | 2 |
CP068256.2:25 461 789 | 295 | SINE (Alu) | KIAA1671 | Intron | 2 |
CP068256.2:25 532 879 | 97 | SINE (Alu) | KIAA1671 | Intron | 2 |
CP068256.2:27 234 737 | 2 644 | Retroposon (SVA) | MIATNB | Intron | 2 |
CP068256.2:29 242 941 | 313 | SINE (Alu) | CCDC117 | Intron | 2 |
CP068256.2:30 535 147 | 329 | SINE (Alu) | HORMAD2-AS1 | Intron | 2 |
CP068256.2:32 056 335 | 298 | Retroposon (SVA) | SFI1 | Intron | 1 |
CP068256.2:32 276 538 | 316 | SINE (Alu) | DEPDC5 | Intron | 2 |
CP068256.2:32 887 860 | 292 | SINE (Alu) | BPIFC | Intron | 2 |
CP068256.2:32 895 332 | 328 | SINE (Alu) | BPIFC | Intron | 2 |
CP068256.2:34 131 369 | 121 | SINE (Alu) | LARGE1 | Intron | 2 |
CP068256.2:34 820 706 | 63 | SINE (Alu) | LOC105373012 | Promoter | 2 |
CP068256.2:41 793 756 | 314 | SINE (Alu) | ZC3H7B | Intron | 2 |
CP068256.2:42 223 412 | 317 | SINE (Alu) | MEI1 | Intron | 2 |
CP068256.2:42 592 175 | 59 | LTR (ERV1) | NDUFA6-DT | Intron | 1 |
CP068256.2:43 299 732 | 314 | SINE (Alu) | ARFGAP3 | Intron | 2 |
CP068256.2:43 654 158 | 327 | SINE (Alu) | TTLL12 | Intron | 2 |
CP068256.2:44 411 840 | 1 147 | LINE (L1) | PNPLA3 | Intron | 1 |
CP068257.2:12 279 102 | 188 | Retroposon (SVA) | LOC110091776 | Promoter | 2 |
CP068257.2:13 911 959 | 387 | LINE (L1) | LOC105369302 | Intron | 2 |
CP068257.2:15 595 054 | 1 308 | LINE (L1) | LOC107985511 | Intron | 2 |
CP068257.2:19 777 205 | 347 | LTR (ERVL) | NCAM2 | Intron | 2 |
CP068257.2:21 725 994 | 324 | SINE (Alu) | D21S2088E | Intron | 2 |
CP068257.2:25 235 329 | 330 | SINE (Alu) | LOC105372760 | Intron | 2 |
CP068257.2:27 546 510 | 353 | SINE (Alu) | LOC105372767 | Intron | 2 |
CP068257.2:27 595 748 | 333 | SINE (Alu) | LINC00189 | Intron | 2 |
CP068257.2:34 874 715 | 322 | SINE (Alu) | CLDN14-AS1 | Intron | 2 |
CP068257.2:36 014 613 | 323 | SINE (Alu) | KCNJ6-AS1 | Intron | 2 |
CP068257.2:38 974 146 | 117 | SINE (Alu) | DSCAM | Intron | 2 |
CP068257.2:39 632 883 | 50 | LTR (ERV1) | BACE2 | Intron | 2 |
CP068257.2:41 166 978 | 96 | Retroposon (SVA) | LINC01668 | Intron | 2 |
CP068258.2:1 615 940 | 575 | LTR (ERV1) | SIRPB1 | Intron | 2 |
CP068258.2:3 292 706 | 311 | SINE (Alu) | DNAAF9 | Intron | 2 |
CP068258.2:9 684 360 | 118 | LTR (ERV1) | PAK5 | Intron | 2 |
CP068258.2:15 176 135 | 291 | SINE (Alu) | MACROD2 | Intron | 2 |
CP068258.2:16 549 972 | 324 | LINE (L1) | KIF16B | Intron | 2 |
CP068258.2:20 169 566 | 326 | SINE (Alu) | CFAP61 | Intron | 2 |
CP068258.2:21 237 844 | 1 437 | LINE (L1) | KIZ | Intron | 2 |
CP068258.2:25 627 216 | 443 | Retroposon (SVA) | NINL | Intron | 2 |
CP068258.2:30 450 663 | 321 | SINE (Alu) | FAM242A | Intron | 2 |
CP068258.2:36 934 692 | 183 | SINE (Alu) | PROCR | Intron | 2 |
CP068258.2:37 082 086 | 301 | SINE (Alu) | UQCC1 | Intron | 2 |
CP068258.2:37 591 607 | 323 | SINE (Alu) | PHF20 | Intron | 2 |
CP068258.2:37 925 585 | 291 | SINE (Alu) | EPB41L1 | Intron | 2 |
CP068258.2:38 114 785 | 94 | SINE (Alu) | DLGAP4 | Intron | 2 |
CP068258.2:38 911 585 | 311 | SINE (Alu) | RPN2 | Intron | 2 |
CP068258.2:50 455 768 | 193 | SINE (Alu) | PREX1 | Intron | 2 |
CP068258.2:62 091 491 | 125 | SINE (Alu) | MIR646HG | Intron | 2 |
CP068258.2:63 187 710 | 320 | SINE (Alu) | CDH4 | Intron | 2 |
CP068258.2:65 692 890 | 325 | SINE (Alu) | TPD52L2 | Intron | 2 |
CP068259.2:2 535 989 | 124 | SINE (Alu) | GNG7 | Intron | 2 |
CP068259.2:3 262 717 | 319 | SINE (Alu) | CELF5 | Intron | 2 |
CP068259.2:5 844 818 | 69 | LTR (ERV1) | FUT3 | Promoter | 2 |
CP068259.2:5 844 818 | 69 | LTR (ERV1) | LOC101928844 | Intron | 2 |
CP068259.2:6 141 005 | 266 | SINE (Alu) | ACSBG2 | Intron | 2 |
CP068259.2:6 151 665 | 291 | SINE (Alu) | ACSBG2 | Intron | 2 |
CP068259.2:6 344 283 | 75 | Retroposon (SVA) | ACER1 | Intron | 2 |
CP068259.2:6 913 159 | 323 | SINE (Alu) | ADGRE1 | Intron | 2 |
CP068259.2:10 463 384 | 310 | SINE (Alu) | ICAM3 | Intron | 2 |
CP068259.2:12 746 120 | 175 | Retroposon (SVA) | ZNF791 | Intron | 2 |
CP068259.2:13 829 910 | 126 | Retroposon (SVA) | LOC105372284 | Intron | 2 |
CP068259.2:16 013 804 | 117 | LINE (L1) | CYP4F2 | Intron | 2 |
CP068259.2:17 856 398 | 164 | SINE (Alu) | MAP1S | Intron | 2 |
CP068259.2:18 265 771 | 319 | SINE (Alu) | MAST3 | Intron | 2 |
CP068259.2:21 703 198 | 265 | SINE (Alu) | LOC124904670 | Intron | 2 |
CP068259.2:21 715 981 | 319 | SINE (Alu) | LOC101929007 | Intron | 2 |
CP068259.2:21 716 141 | 146 | SINE (Alu) | LOC101929007 | Intron | 2 |
CP068259.2:21 722 228 | 301 | SINE (Alu) | LOC101929007 | Intron | 1 |
CP068259.2:23 273 105 | 316 | SINE (Alu) | ZNF730 | Intron | 2 |
CP068259.2:23 988 183 | 49 | Retroposon (SVA) | RPSA2 | Intron | 2 |
CP068259.2:38 451 416 | 317 | SINE (Alu) | TYROBP | Intron | 2 |
CP068259.2:40 925 916 | 77 | Retroposon (SVA) | SIPA1L3 | Intron | 2 |
CP068259.2:41 072 000 | 114 | SINE (Alu) | SPINT2 | Intron | 2 |
CP068259.2:41 343 628 | 134 | SINE (Alu) | RYR1 | Intron | 2 |
CP068259.2:47 849 106 | 92 | SINE (Alu) | RELB | Intron | 2 |
CP068259.2:54 049 533 | 135 | SINE (Alu) | LOC105372442 | Intron | 2 |
CP068259.2:54 361 759 | 310 | SINE (Alu) | LINC01872 | Intron | 2 |
CP068259.2:55 530 373 | 105 | LINE (L1) | ZNF534 | Intron | 2 |
CP068259.2:55 665 437 | 135 | SINE (Alu) | ZNF701 | Intron | 2 |
CP068259.2:55 896 337 | 126 | Retroposon (SVA) | ZNF600 | Intron | 2 |
CP068259.2:56 195 815 | 316 | SINE (Alu) | ZNF415 | Intron | 2 |
CP068259.2:59 549 110 | 316 | SINE (Alu) | ZNF667 | Intron | 2 |
CP068259.2:59 694 584 | 318 | SINE (Alu) | ZNF71 | Intron | 2 |
CP068259.2:61 203 202 | 329 | SINE (Alu) | ZSCAN18 | Intron | 2 |
CP068259.2:61 501 633 | 175 | Retroposon (SVA) | ZNF584 | Intron | 2 |
CP068259.2:646 264 | 72 | SINE (Alu) | PRSS57 | Intron | 2 |
CP068259.2:773 676 | 311 | SINE (Alu) | PLPPR3 | Intron | 2 |
CP068260.2:3 032 121 | 146 | SINE (Alu) | EMILIN2 | Intron | 2 |
CP068260.2:8 797 339 | 112 | SINE (Alu) | RAB12 | Intron | 2 |
CP068260.2:9 388 660 | 334 | SINE (Alu) | ANKRD12 | Intron | 2 |
CP068260.2:11 073 229 | 315 | SINE (Alu) | PIEZO2 | Intron | 2 |
CP068260.2:12 778 756 | 330 | SINE (Alu) | SPIRE1 | Intron | 2 |
CP068260.2:22 171 533 | 321 | SINE (Alu) | LINC01900 | Intron | 2 |
CP068260.2:27 152 079 | 318 | SINE (Alu) | CHST9 | Intron | 2 |
CP068260.2:35 273 621 | 317 | SINE (Alu) | MAPRE2 | Intron | 2 |
CP068260.2:45 956 220 | 80 | SINE (Alu) | LOC105372093 | Intron | 2 |
CP068260.2:48 538 401 | 57 | SINE (Alu) | LOC124904352 | Intron | 2 |
CP068260.2:52 608 255 | 324 | SINE (Alu) | DCC | Intron | 2 |
CP068260.2:53 663 279 | 322 | SINE (Alu) | DCC | Intron | 2 |
CP068260.2:55 681 933 | 318 | SINE (Alu) | MIR4529 | Promoter | 2 |
CP068260.2:55 681 933 | 318 | SINE (Alu) | TCF4-AS1 | Intron | 2 |
CP068260.2:56 003 038 | 317 | SINE (Alu) | LOC105372130 | Intron | 2 |
CP068260.2:56 891 790 | 330 | SINE (Alu) | WDR7 | Intron | 2 |
CP068260.2:57 914 128 | 143 | SINE (Alu) | ATP8B1 | Intron | 2 |
CP068260.2:59 685 435 | 313 | SINE (Alu) | CCBE1 | Intron | 2 |
CP068260.2:66 072 639 | 338 | SINE (Alu) | CDH7 | Intron | 2 |
CP068260.2:70 644 924 | 312 | SINE (Alu) | RPS2P6 | Promoter | 2 |
CP068260.2:70 644 924 | 312 | SINE (Alu) | LOC124908034 | Intron | 2 |
CP068260.2:71 698 063 | 54 | LINE (L1) | LOC107985179 | Intron | 2 |
CP068260.2:73 827 616 | 320 | SINE (Alu) | LOC105372190 | Intron | 2 |
CP068260.2:77 079 849 | 311 | SINE (Alu) | ZNF236 | Promoter | 2 |
CP068260.2:77 079 849 | 311 | SINE (Alu) | ZNF236 | Intron | 2 |
CP068260.2:77 259 074 | 126 | Retroposon (SVA) | MBP | Intron | 2 |
CP068260.2:77 275 276 | 317 | SINE (Alu) | MBP | Intron | 2 |
CP068260.2:544 914 | 327 | SINE (Alu) | LOC107985155 | Intron | 2 |
CP068261.2:2 178 843 | 134 | SINE (Alu) | SMG6 | Intron | 2 |
CP068261.2:4 021 910 | 134 | SINE (Alu) | ZZEF1 | Intron | 2 |
CP068261.2:5 409 832 | 324 | SINE (Alu) | NLRP1 | Intron | 2 |
CP068261.2:6 338 036 | 119 | LINE (L1) | LOC107985017 | Intron | 2 |
CP068261.2:9 176 006 | 134 | SINE (Alu) | STX8 | Intron | 2 |
CP068261.2:10 082 999 | 317 | SINE (Alu) | GAS7 | Intron | 2 |
CP068261.2:11 562 452 | 329 | SINE (Alu) | DNAH9 | Intron | 2 |
CP068261.2:13 440 691 | 296 | SINE (Alu) | HS3ST3A1 | Intron | 2 |
CP068261.2:13 709 042 | 285 | SINE (Alu) | LOC100506974 | Intron | 2 |
CP068261.2:16 232 917 | 317 | SINE (Alu) | PIGL | Intron | 2 |
CP068261.2:16 533 126 | 1 318 | Retroposon (SVA) | ZNF624 | Intron | 2 |
CP068261.2:18 021 722 | 309 | SINE (Alu) | TUBB8P11 | Intron | 2 |
CP068261.2:18 680 625 | 315 | SINE (Alu) | TRIM16L | Intron | 2 |
CP068261.2:20 506 861 | 152 | SINE (Alu) | LGALS9B | Intron | 2 |
CP068261.2:31 681 321 | 760 | Retroposon (SVA) | SUZ12P1 | Intron | 2 |
CP068261.2:32 278 209 | 349 | LINE (L1) | NF1 | Intron | 2 |
CP068261.2:33 256 488 | 169 | SINE (Alu) | RHBDL3 | Intron | 2 |
CP068261.2:33 264 228 | 185 | SINE (Alu) | RHBDL3 | Intron | 2 |
CP068261.2:38 008 692 | 192 | SINE (Alu) | AATF | Intron | 2 |
CP068261.2:39 457 705 | 318 | SINE (Alu) | SRCIN1 | Intron | 2 |
CP068261.2:41 050 467 | 310 | SINE (Alu) | RAPGEFL1 | Intron | 2 |
CP068261.2:49 291 096 | 323 | SINE (Alu) | SKAP1 | Intron | 2 |
CP068261.2:49 989 179 | 224 | Retroposon (SVA) | B4GALNT2 | Intron | 2 |
CP068261.2:61 447 465 | 325 | SINE (Alu) | LINC01999 | Intron | 2 |
CP068261.2:62 777 760 | 311 | SINE (Alu) | INTS2 | Intron | 2 |
CP068261.2:69 968 391 | 311 | SINE (Alu) | ABCA6 | Intron | 2 |
CP068261.2:73 573 179 | 318 | SINE (Alu) | SLC39A11 | Intron | 2 |
CP068261.2:75 935 935 | 316 | SINE (Alu) | KCTD2 | Intron | 2 |
CP068261.2:78 886 239 | 313 | SINE (Alu) | TNRC6C | Intron | 2 |
CP068261.2:79 403 508 | 181 | SINE (Alu) | DNAH17 | Intron | 2 |
CP068261.2:82 055 352 | 326 | SINE (Alu) | AATK | Intron | 2 |
CP068261.2:82 527 912 | 321 | SINE (Alu) | NPLOC4 | Promoter | 2 |
CP068261.2:82 527 912 | 321 | SINE (Alu) | NPLOC4 | Intron | 2 |
CP068261.2:455 386 | 97 | Retroposon (SVA) | VPS53 | Intron | 2 |
CP068262.2:4 788 797 | 329 | SINE (Alu) | ZNF500 | Intron | 2 |
CP068262.2:5 324 682 | 319 | SINE (Alu) | RBFOX1 | Intron | 2 |
CP068262.2:6 773 894 | 1 436 | LINE (L1) | RBFOX1 | Intron | 2 |
CP068262.2:6 869 242 | 326 | SINE (Alu) | RBFOX1 | Intron | 2 |
CP068262.2:7 207 291 | 324 | SINE (Alu) | RBFOX1 | Intron | 2 |
CP068262.2:11 372 328 | 118 | Retroposon (SVA) | LOC105371082 | Intron | 2 |
CP068262.2:11 372 371 | 294 | Retroposon (SVA) | LOC105371082 | Intron | 2 |
CP068262.2:15 116 749 | 85 | SINE (Alu) | PDXDC1 | Intron | 2 |
CP068262.2:15 403 897 | 313 | SINE (Alu) | MPV17L | Intron | 2 |
CP068262.2:19 149 959 | 344 | SINE (Alu) | SYT17 | Intron | 2 |
CP068262.2:19 426 191 | 323 | SINE (Alu) | TMC5 | Intron | 2 |
CP068262.2:19 437 051 | 318 | SINE (Alu) | GDE1 | Intron | 2 |
CP068262.2:22 425 396 | 311 | SINE (Alu) | LOC105371126 | Intron | 2 |
CP068262.2:23 793 318 | 312 | SINE (Alu) | GGA2 | Intron | 2 |
CP068262.2:24 129 334 | 324 | SINE (Alu) | PRKCB | Intron | 2 |
CP068262.2:63 015 018 | 318 | SINE (Alu) | RSPRY1 | Intron | 2 |
CP068262.2:64 052 598 | 321 | SINE (Alu) | CFAP263 | Intron | 2 |
CP068262.2:64 555 274 | 134 | SINE (Alu) | LOC107984867 | Intron | 1 |
CP068262.2:64 559 334 | 56 | SINE (Alu) | LOC107984867 | Intron | 2 |
CP068262.2:65 734 387 | 319 | SINE (Alu) | LINC02141 | Intron | 2 |
CP068262.2:65 799 060 | 320 | SINE (Alu) | LINC02141 | Intron | 2 |
CP068262.2:67 801 060 | 330 | SINE (Alu) | CDH8 | Intron | 2 |
CP068262.2:75 622 947 | 53 | SINE (Alu) | WWP2 | Intron | 2 |
CP068262.2:83 252 469 | 314 | SINE (Alu) | MON1B | Intron | 2 |
CP068262.2:83 862 431 | 134 | SINE (Alu) | VAT1L | Intron | 2 |
CP068262.2:84 715 226 | 323 | SINE (Alu) | WWOX | Intron | 2 |
CP068262.2:86 496 713 | 321 | SINE (Alu) | DYNLRB2-AS1 | Intron | 2 |
CP068262.2:86 724 756 | 326 | SINE (Alu) | CDYL2 | Intron | 2 |
CP068262.2:87 305 197 | 311 | SINE (Alu) | BCO1 | Intron | 2 |
CP068262.2:88 943 271 | 321 | SINE (Alu) | CDH13 | Intron | 2 |
CP068262.2:91 141 715 | 330 | SINE (Alu) | KIAA0513 | Intron | 2 |
CP068262.2:94 530 929 | 334 | SINE (Alu) | ZFPM1 | Intron | 2 |
CP068262.2:449 468 | 320 | SINE (Alu) | RAB11FIP3 | Intron | 1 |
CP068262.2:480 325 | 310 | SINE (Alu) | RAB11FIP3 | Intron | 2 |
CP068263.2:20 002 339 | 330 | SINE (Alu) | LOC124907500 | Intron | 2 |
CP068263.2:20 256 381 | 135 | SINE (Alu) | HERC2P2 | Intron | 2 |
CP068263.2:21 696 325 | 308 | SINE (Alu) | LOC107984787 | Intron | 2 |
CP068263.2:33 461 719 | 125 | Retroposon (SVA) | DPH6-DT | Intron | 2 |
CP068263.2:33 609 416 | 309 | SINE (Alu) | DPH6-DT | Intron | 2 |
CP068263.2:38 436 995 | 709 | LINE (L1) | KNL1 | Intron | 2 |
CP068263.2:38 614 143 | 315 | SINE (Alu) | DNAJC17 | Promoter | 2 |
CP068263.2:38 614 143 | 315 | SINE (Alu) | ZFYVE19 | Intron | 2 |
CP068263.2:39 531 742 | 328 | SINE (Alu) | MGA | Intron | 2 |
CP068263.2:43 641 520 | 325 | SINE (Alu) | LOC105370802 | Intron | 2 |
CP068263.2:45 023 038 | 6 055 | LINE (L1) | SEMA6D | Intron | 2 |
CP068263.2:49 102 335 | 66 | Retroposon (SVA) | CYP19A1 | Intron | 2 |
CP068263.2:51 705 824 | 345 | SINE (Alu) | UNC13C | Intron | 2 |
CP068263.2:52 318 050 | 314 | SINE (Alu) | UNC13C | Intron | 2 |
CP068263.2:53 913 580 | 183 | Retroposon (SVA) | LOC124903498 | Intron | 1 |
CP068263.2:53 913 806 | 51 | Retroposon (SVA) | LOC124903498 | Intron | 1 |
CP068263.2:55 792 313 | 106 | SINE (Alu) | ALDH1A2 | Intron | 2 |
CP068263.2:56 106 612 | 320 | SINE (Alu) | LOC124907518 | Intron | 2 |
CP068263.2:58 168 194 | 330 | SINE (Alu) | ANXA2 | Intron | 2 |
CP068263.2:64 197 247 | 323 | SINE (Alu) | TIPIN | Intron | 2 |
CP068263.2:64 824 381 | 312 | SINE (Alu) | SMAD3-DT | Intron | 2 |
CP068263.2:65 174 494 | 318 | SINE (Alu) | IQCH | Intron | 2 |
CP068263.2:67 062 769 | 57 | SINE (Alu) | GLCE | Intron | 2 |
CP068263.2:69 587 991 | 175 | Retroposon (SVA) | THSD4 | Intron | 2 |
CP068263.2:74 404 844 | 281 | SINE (Alu) | SCAPER | Intron | 2 |
CP068263.2:75 994 841 | 164 | SINE (Alu) | CIB2 | Promoter | 2 |
CP068263.2:76 383 514 | 147 | Retroposon (SVA) | HYKK | Intron | 2 |
CP068263.2:76 507 733 | 318 | SINE (Alu) | CHRNB4 | Intron | 2 |
CP068263.2:77 366 877 | 315 | SINE (Alu) | LOC105370919 | Promoter | 2 |
CP068263.2:82 652 622 | 73 | SINE (Alu) | SLC28A1 | Intron | 2 |
CP068263.2:83 196 621 | 334 | SINE (Alu) | AKAP13 | Intron | 2 |
CP068263.2:83 433 722 | 325 | SINE (Alu) | AKAP13 | Intron | 2 |
CP068263.2:90 530 518 | 99 | Retroposon (SVA) | LOC101926994 | Intron | 1 |
CP068263.2:90 786 186 | 318 | SINE (Alu) | CHD2 | Intron | 2 |
CP068263.2:93 349 076 | 291 | SINE (Alu) | LOC105370995 | Intron | 2 |
CP068263.2:96 121 828 | 565 | LINE (L1) | LINC02351 | Intron | 2 |
CP068263.2:248 491 | 313 | SINE (Alu) | TUBB8P11 | Intron | 1 |
CP068264.2:14 215 583 | 352 | SINE (Alu) | OR4K14 | Intron | 2 |
CP068264.2:14 703 671 | 126 | Retroposon (SVA) | RNASE10 | Intron | 2 |
CP068264.2:14 703 880 | 73 | Retroposon (SVA) | RNASE10 | Intron | 2 |
CP068264.2:17 906 483 | 330 | SINE (Alu) | LOC105370409 | Intron | 2 |
CP068264.2:18 207 639 | 2 014 | LINE (L1) | DHRS4L2 | Intron | 2 |
CP068264.2:18 410 930 | 166 | SINE (Alu) | CHMP4A | Intron | 2 |
CP068264.2:29 128 780 | 87 | SINE (Alu) | SRP54-AS1 | Intron | 2 |
CP068264.2:29 131 238 | 312 | SINE (Alu) | SRP54-AS1 | Intron | 2 |
CP068264.2:29 208 088 | 314 | SINE (Alu) | SRP54 | Intron | 2 |
CP068264.2:34 604 158 | 331 | SINE (Alu) | LOC105370465 | Intron | 2 |
CP068264.2:45 556 369 | 337 | SINE (Alu) | LINC00640 | Intron | 2 |
CP068264.2:46 330 362 | 130 | LTR (ERV1) | LINC02319 | Intron | 2 |
CP068264.2:49 534 324 | 320 | SINE (Alu) | FBXO34 | Intron | 2 |
CP068264.2:67 389 826 | 85 | Retroposon (SVA) | PSEN1 | Intron | 2 |
CP068264.2:67 743 055 | 1 418 | LTR (ERV1) | ACOT1 | Intron | 1 |
CP068264.2:67 743 505 | 719 | LTR (ERV1) | ACOT1 | Intron | 1 |
CP068264.2:67 754 433 | 185 | SINE (Alu) | HEATR4 | Intron | 2 |
CP068264.2:67 764 611 | 309 | SINE (Alu) | HEATR4 | Intron | 2 |
CP068264.2:69 938 554 | 1 012 | LINE (L1) | TTLL5 | Intron | 2 |
CP068264.2:71 669 839 | 318 | SINE (Alu) | AHSA1 | Intron | 2 |
CP068264.2:72 724 910 | 331 | SINE (Alu) | NRXN3 | Intron | 2 |
CP068264.2:87 596 457 | 315 | SINE (Alu) | UNC79 | Intron | 2 |
CP068264.2:94 611 756 | 326 | SINE (Alu) | WDR25 | Intron | 2 |
CP068264.2:95 760 108 | 331 | SINE (Alu) | LOC105370673 | Intron | 2 |
CP068264.2:101 041 873 | 367 | LTR (ERVL) | LOC124907431 | Promoter | 2 |
CP068265.2:13 715 682 | 197 | SINE (Alu) | FAM230C | Intron | 2 |
CP068265.2:20 642 568 | 145 | Retroposon (SVA) | ZDHHC20 | Intron | 2 |
CP068265.2:20 642 569 | 497 | Retroposon (SVA) | ZDHHC20 | Intron | 2 |
CP068265.2:24 474 413 | 135 | SINE (Alu) | MTMR6 | Intron | 2 |
CP068265.2:27 488 271 | 321 | SINE (Alu) | PAN3 | Intron | 2 |
CP068265.2:28 214 233 | 66 | LTR (ERV1) | MTUS2 | Intron | 2 |
CP068265.2:28 541 097 | 311 | SINE (Alu) | MTUS2 | Intron | 2 |
CP068265.2:28 603 950 | 322 | SINE (Alu) | MTUS2 | Intron | 2 |
CP068265.2:29 823 844 | 319 | SINE (Alu) | HMGB1 | Intron | 2 |
CP068265.2:33 759 335 | 76 | Retroposon (SVA) | LINC02343 | Intron | 2 |
CP068265.2:41 100 875 | 78 | Retroposon (SVA) | VWA8 | Intron | 2 |
CP068265.2:41 372 209 | 324 | SINE (Alu) | DGKH | Intron | 2 |
CP068265.2:45 294 975 | 308 | SINE (Alu) | CPB2-AS1 | Intron | 2 |
CP068265.2:45 366 990 | 318 | SINE (Alu) | LCP1 | Intron | 2 |
CP068265.2:45 778 723 | 328 | SINE (Alu) | LRCH1 | Intron | 2 |
CP068265.2:45 805 236 | 3 087 | Retroposon (SVA) | LRCH1 | Intron | 2 |
CP068265.2:48 723 116 | 77 | Retroposon (SVA) | SETDB2-PHF11 | Intron | 2 |
CP068265.2:59 110 423 | 326 | SINE (Alu) | DIAPH3 | Intron | 2 |
CP068265.2:77 302 799 | 313 | SINE (Alu) | OBI1-AS1 | Intron | 2 |
CP068265.2:84 144 201 | 231 | SINE (Alu) | LOC105370290 | Intron | 2 |
CP068265.2:89 698 660 | 101 | LTR (ERV1) | LINC01049 | Intron | 2 |
CP068265.2:91 376 118 | 319 | SINE (Alu) | GPC5 | Intron | 2 |
CP068265.2:93 800 756 | 144 | SINE (Alu) | TGDS | Promoter | 2 |
CP068265.2:98 181 349 | 135 | SINE (Alu) | DOCK9 | Intron | 2 |
CP068265.2:100 098 881 | 318 | SINE (Alu) | NALCN-AS1 | Intron | 2 |
CP068265.2:107 842 850 | 61 | LINE (L1) | MYO16 | Intron | 2 |
CP068265.2:109 388 985 | 315 | SINE (Alu) | COL4A1 | Intron | 2 |
CP068265.2:109 862 682 | 128 | LTR (ERV1) | NAXD | Intron | 2 |
CP068265.2:111 926 533 | 80 | Retroposon (SVA) | ATP11AUN | Intron | 2 |
CP068265.2:112 115 809 | 313 | SINE (Alu) | ATP11A | Intron | 2 |
CP068265.2:113 324 614 | 325 | SINE (Alu) | RASA3 | Intron | 2 |
CP068266.2:1 976 788 | 319 | SINE (Alu) | CACNA1C | Intron | 2 |
CP068266.2:2 835 906 | 262 | SINE (Alu) | ITFG2 | Intron | 2 |
CP068266.2:3 101 640 | 128 | Retroposon (SVA) | TSPAN9 | Intron | 2 |
CP068266.2:6 807 792 | 255 | SINE (Alu) | CD4 | Intron | 2 |
CP068266.2:9 882 704 | 250 | SINE (Alu) | CLEC12A | Intron | 2 |
CP068266.2:10 960 223 | 334 | SINE (Alu) | PRH1-PRR4 | Intron | 2 |
CP068266.2:10 975 580 | 304 | SINE (Alu) | PRH1-PRR4 | Intron | 2 |
CP068266.2:12 283 007 | 97 | Retroposon (SVA) | BORCS5 | Intron | 2 |
CP068266.2:12 654 312 | 1 782 | LINE (L1) | APOLD1 | Intron | 2 |
CP068266.2:14 829 038 | 321 | SINE (Alu) | ARHGDIB | Promoter | 2 |
CP068266.2:14 829 038 | 321 | SINE (Alu) | ARHGDIB | Intron | 2 |
CP068266.2:18 474 599 | 288 | SINE (Alu) | PIK3C2G | Intron | 2 |
CP068266.2:20 199 299 | 320 | SINE (Alu) | LOC105369688 | Intron | 2 |
CP068266.2:20 588 176 | 331 | SINE (Alu) | SLCO1C1 | Intron | 2 |
CP068266.2:21 811 737 | 332 | SINE (Alu) | ABCC9 | Intron | 2 |
CP068266.2:25 390 110 | 470 | LINE (L1) | LMNTD1 | Intron | 2 |
CP068266.2:26 657 326 | 586 | Retroposon (SVA) | ITPR2 | Intron | 2 |
CP068266.2:26 657 354 | 156 | Retroposon (SVA) | ITPR2 | Intron | 1 |
CP068266.2:26 657 772 | 149 | Retroposon (SVA) | ITPR2 | Intron | 1 |
CP068266.2:27 153 024 | 326 | SINE (Alu) | STK38L | Intron | 2 |
CP068266.2:27 583 597 | 315 | SINE (Alu) | MRPS35 | Intron | 2 |
CP068266.2:27 945 242 | 6 061 | LINE (L1) | LOC105369710 | Intron | 2 |
CP068266.2:28 158 038 | 315 | SINE (Alu) | CCDC91 | Intron | 2 |
CP068266.2:29 535 979 | 185 | SINE (Alu) | TMTC1 | Intron | 2 |
CP068266.2:29 543 253 | 312 | SINE (Alu) | TMTC1 | Intron | 2 |
CP068266.2:32 686 985 | 313 | SINE (Alu) | PKP2 | Intron | 2 |
CP068266.2:40 231 437 | 306 | SINE (Alu) | LRRK2 | Intron | 2 |
CP068266.2:40 391 169 | 306 | SINE (Alu) | MUC19 | Intron | 2 |
CP068266.2:41 225 229 | 310 | SINE (Alu) | PDZRN4 | Intron | 2 |
CP068266.2:41 239 964 | 344 | LINE (L1) | PDZRN4 | Intron | 2 |
CP068266.2:42 186 236 | 98 | Retroposon (SVA) | YAF2 | Intron | 2 |
CP068266.2:42 369 287 | 73 | LTR (ERVK) | PPHLN1 | Intron | 2 |
CP068266.2:44 984 370 | 310 | SINE (Alu) | DBX2 | Intron | 2 |
CP068266.2:50 739 488 | 308 | SINE (Alu) | ATF1 | Intron | 2 |
CP068266.2:53 648 538 | 315 | SINE (Alu) | ATP5MC2 | Promoter | 2 |
CP068266.2:56 751 565 | 49 | Retroposon (SVA) | HSD17B6 | Intron | 1 |
CP068266.2:59 085 415 | 340 | SINE (Alu) | LRIG3-DT | Intron | 2 |
CP068266.2:62 862 683 | 329 | SINE (Alu) | LOC105369795 | Intron | 2 |
CP068266.2:64 182 842 | 85 | LINE (L1) | KICS2 | Intron | 2 |
CP068266.2:64 720 062 | 175 | SINE (Alu) | GNS | Intron | 2 |
CP068266.2:66 597 283 | 332 | SINE (Alu) | GRIP1 | Intron | 2 |
CP068266.2:67 934 329 | 325 | SINE (Alu) | LINC01479 | Intron | 2 |
CP068266.2:77 981 522 | 329 | SINE (Alu) | NAV3 | Intron | 2 |
CP068266.2:91 425 858 | 292 | SINE (Alu) | LOC105369896 | Intron | 2 |
CP068266.2:94 256 702 | 320 | SINE (Alu) | PLXNC1 | Intron | 2 |
CP068266.2:101 881 504 | 101 | SINE (Alu) | DRAM1 | Intron | 2 |
CP068266.2:104 285 274 | 50 | Retroposon (SVA) | TXNRD1 | Intron | 2 |
CP068266.2:104 884 820 | 187 | SINE (Alu) | SLC41A2 | Intron | 2 |
CP068266.2:105 341 485 | 316 | SINE (Alu) | LOC105369957 | Intron | 2 |
CP068266.2:121 878 118 | 191 | SINE (Alu) | HPD | Intron | 2 |
CP068266.2:121 990 164 | 462 | Retroposon (SVA) | CFAP251 | Intron | 1 |
CP068266.2:122 704 280 | 49 | Retroposon (SVA) | LOC124906985 | Intron | 1 |
CP068266.2:122 704 283 | 49 | Retroposon (SVA) | LOC124906985 | Intron | 1 |
CP068266.2:124 855 294 | 309 | SINE (Alu) | SCARB1 | Intron | 2 |
CP068266.2:126 414 081 | 326 | SINE (Alu) | LINC02825 | Intron | 2 |
CP068266.2:126 429 324 | 327 | SINE (Alu) | LINC02825 | Intron | 2 |
CP068266.2:126 723 341 | 319 | SINE (Alu) | LINC02824 | Intron | 2 |
CP068266.2:127 028 600 | 224 | SINE (Alu) | LOC105370063 | Intron | 2 |
CP068266.2:129 608 033 | 326 | SINE (Alu) | TMEM132D | Intron | 2 |
CP068266.2:130 642 135 | 141 | SINE (Alu) | RIMBP2 | Intron | 2 |
CP068266.2:779 626 | 137 | SINE (Alu) | WNK1 | Intron | 2 |
CP068267.2:2 838 941 | 124 | SINE (Alu) | KCNQ1 | Intron | 2 |
CP068267.2:4 952 227 | 236 | SINE (Alu) | MMP26 | Intron | 2 |
CP068267.2:5 010 999 | 301 | SINE (Alu) | MMP26 | Intron | 2 |
CP068267.2:7 389 912 | 329 | SINE (Alu) | SYT9 | Intron | 2 |
CP068267.2:7 466 057 | 327 | SINE (Alu) | SYT9 | Intron | 2 |
CP068267.2:8 949 899 | 318 | SINE (Alu) | DENND2B | Intron | 2 |
CP068267.2:9 857 725 | 325 | SINE (Alu) | SBF2-AS1 | Intron | 2 |
CP068267.2:9 948 771 | 330 | SINE (Alu) | LOC101928008 | Intron | 2 |
CP068267.2:14 573 741 | 321 | SINE (Alu) | COPB1 | Intron | 2 |
CP068267.2:16 096 396 | 322 | SINE (Alu) | SOX6 | Intron | 2 |
CP068267.2:17 004 803 | 253 | Retroposon (SVA) | PLEKHA7 | Intron | 2 |
CP068267.2:17 272 181 | 313 | SINE (Alu) | PIK3C2A | Intron | 2 |
CP068267.2:22 361 771 | 124 | LINE (L1) | ANO5 | Intron | 2 |
CP068267.2:22 364 247 | 1 122 | LINE (L1) | ANO5 | Intron | 2 |
CP068267.2:24 902 348 | 320 | SINE (Alu) | LUZP2 | Intron | 2 |
CP068267.2:25 682 675 | 345 | SINE (Alu) | LINC02699 | Intron | 2 |
CP068267.2:26 799 043 | 91 | SINE (Alu) | ANO3 | Intron | 2 |
CP068267.2:27 262 274 | 6 058 | LINE (L1) | BBOX1 | Intron | 2 |
CP068267.2:27 576 700 | 388 | LINE (L1) | LGR4 | Intron | 2 |
CP068267.2:27 776 457 | 331 | LTR (ERV1) | BDNF-AS | Intron | 2 |
CP068267.2:31 266 980 | 316 | SINE (Alu) | DCDC1 | Intron | 2 |
CP068267.2:32 548 205 | 310 | SINE (Alu) | WT1 | Intron | 2 |
CP068267.2:34 364 862 | 324 | SINE (Alu) | ABTB2 | Intron | 2 |
CP068267.2:42 181 175 | 330 | SINE (Alu) | LINC02745 | Intron | 2 |
CP068267.2:47 253 984 | 175 | Retroposon (SVA) | CSTPP1 | Intron | 2 |
CP068267.2:47 950 030 | 304 | SINE (Alu) | NUP160 | Intron | 2 |
CP068267.2:49 811 499 | 302 | SINE (Alu) | GRM5P1 | Intron | 2 |
CP068267.2:58 991 318 | 332 | SINE (Alu) | LOC283194 | Intron | 2 |
CP068267.2:60 485 034 | 80 | LINE (L1) | MS4A13 | Intron | 2 |
CP068267.2:62 482 327 | 319 | SINE (Alu) | AHNAK | Intron | 2 |
CP068267.2:63 882 702 | 259 | LINE (L1) | MARK2 | Intron | 2 |
CP068267.2:66 210 945 | 320 | SINE (Alu) | PACS1 | Intron | 2 |
CP068267.2:75 339 542 | 77 | Retroposon (SVA) | RPS3 | Intron | 2 |
CP068267.2:77 212 145 | 313 | SINE (Alu) | GDPD4 | Intron | 2 |
CP068267.2:78 718 193 | 329 | SINE (Alu) | TENM4 | Intron | 2 |
CP068267.2:79 061 406 | 55 | LTR (ERVL) | TENM4 | Intron | 2 |
CP068267.2:86 200 699 | 317 | SINE (Alu) | EED | Intron | 2 |
CP068267.2:89 394 639 | 332 | SINE (Alu) | NOX4 | Intron | 2 |
CP068267.2:96 505 968 | 312 | SINE (Alu) | JRKL-AS1 | Intron | 2 |
CP068267.2:99 867 915 | 328 | SINE (Alu) | CNTN5 | Intron | 2 |
CP068267.2:100 757 844 | 67 | LTR (ERV1) | ARHGAP42 | Intron | 2 |
CP068267.2:101 555 768 | 328 | SINE (Alu) | TRPC6 | Intron | 2 |
CP068267.2:102 479 728 | 220 | SINE (Alu) | LOC124902740 | Intron | 2 |
CP068267.2:104 689 622 | 1 466 | LINE (L1) | LOC105369466 | Intron | 2 |
CP068267.2:104 919 973 | 323 | SINE (Alu) | CASP4LP | Intron | 2 |
CP068267.2:110 116 232 | 326 | SINE (Alu) | ZC3H12C | Intron | 2 |
CP068267.2:114 530 382 | 71 | SINE (Alu) | NXPE2 | Intron | 2 |
CP068267.2:117 829 192 | 317 | SINE (Alu) | DSCAML1 | Intron | 2 |
CP068267.2:118 468 710 | 321 | SINE (Alu) | KMT2A | Intron | 2 |
CP068267.2:118 715 549 | 133 | SINE (Alu) | LOC105369519 | Intron | 2 |
CP068267.2:119 029 799 | 322 | SINE (Alu) | CENATAC | Intron | 2 |
CP068267.2:127 104 382 | 331 | SINE (Alu) | LOC101929473 | Intron | 2 |
CP068267.2:130 127 238 | 452 | Retroposon (SVA) | APLP2 | Intron | 2 |
CP068267.2:473 330 | 318 | SINE (Alu) | ANO9 | Intron | 2 |
CP068268.2:3 530 702 | 315 | SINE (Alu) | LOC105376360 | Intron | 2 |
CP068268.2:4 863 983 | 71 | LINE (L1) | AKR1E2 | Intron | 2 |
CP068268.2:5 002 348 | 326 | SINE (Alu) | AKR1C2 | Intron | 1 |
CP068268.2:9 275 804 | 198 | Retroposon (SVA) | LOC101928272 | Intron | 2 |
CP068268.2:10 778 281 | 170 | SINE (Alu) | CELF2 | Intron | 2 |
CP068268.2:14 722 869 | 64 | LINE (L1) | FAM107B | Intron | 2 |
CP068268.2:19 127 408 | 330 | SINE (Alu) | MALRD1 | Intron | 2 |
CP068268.2:19 280 911 | 317 | SINE (Alu) | MALRD1 | Intron | 2 |
CP068268.2:24 675 640 | 97 | Retroposon (SVA) | ARHGAP21 | Intron | 2 |
CP068268.2:26 090 723 | 315 | SINE (Alu) | MYO3A | Intron | 2 |
CP068268.2:26 503 688 | 304 | SINE (Alu) | APBB1IP | Intron | 2 |
CP068268.2:29 454 890 | 569 | LINE (L1) | SVIL-AS1 | Intron | 2 |
CP068268.2:29 760 714 | 173 | SINE (Alu) | SVIL | Intron | 2 |
CP068268.2:30 356 857 | 312 | SINE (Alu) | MTPAP | Intron | 2 |
CP068268.2:30 638 183 | 126 | SINE (Alu) | LYZL2 | Intron | 2 |
CP068268.2:32 472 006 | 49 | LINE (L1) | LOC101929431 | Intron | 2 |
CP068268.2:34 285 280 | 319 | SINE (Alu) | PARD3 | Intron | 2 |
CP068268.2:44 303 375 | 168 | Retroposon (SVA) | LINC02916 | Intron | 1 |
CP068268.2:49 919 156 | 315 | SINE (Alu) | VSTM4 | Intron | 2 |
CP068268.2:50 012 404 | 337 | SINE (Alu) | TMEM273 | Intron | 2 |
CP068268.2:52 241 562 | 49 | Retroposon (SVA) | PRKG1 | Intron | 2 |
CP068268.2:52 951 752 | 275 | SINE (Alu) | PRKG1 | Intron | 2 |
CP068268.2:55 230 323 | 330 | SINE (Alu) | PCDH15 | Intron | 2 |
CP068268.2:55 607 393 | 314 | SINE (Alu) | PCDH15 | Intron | 2 |
CP068268.2:62 840 679 | 170 | SINE (Alu) | ARID5B | Intron | 2 |
CP068268.2:70 106 724 | 315 | SINE (Alu) | HKDC1 | Intron | 2 |
CP068268.2:71 715 465 | 320 | SINE (Alu) | SGPL1 | Intron | 2 |
CP068268.2:72 303 748 | 327 | SINE (Alu) | CDH23 | Intron | 2 |
CP068268.2:74 555 179 | 337 | SINE (Alu) | BMS1P4-AGAP5 | Intron | 2 |
CP068268.2:85 102 012 | 314 | SINE (Alu) | LRIT2 | Intron | 2 |
CP068268.2:86 896 319 | 311 | SINE (Alu) | GRID1 | Intron | 2 |
CP068268.2:87 790 483 | 338 | SINE (Alu) | BMPR1A | Intron | 2 |
CP068268.2:88 939 111 | 330 | SINE (Alu) | LOC105378414 | Intron | 2 |
CP068268.2:95 704 117 | 392 | LINE (L1) | CYP2C19 | Intron | 2 |
CP068268.2:102 861 010 | 320 | SINE (Alu) | ARMH3 | Intron | 2 |
CP068268.2:102 921 189 | 141 | Retroposon (SVA) | ARMH3 | Intron | 2 |
CP068268.2:104 015 782 | 177 | Retroposon (SVA) | NT5C2 | Intron | 1 |
CP068268.2:104 225 372 | 313 | SINE (Alu) | PCGF6 | Intron | 2 |
CP068268.2:104 471 083 | 259 | SINE (Alu) | LOC124902496 | Promoter | 2 |
CP068268.2:104 471 083 | 259 | SINE (Alu) | NEURL1 | Intron | 2 |
CP068268.2:107 018 352 | 142 | SINE (Alu) | LOC105378469 | Intron | 2 |
CP068268.2:111 134 870 | 311 | SINE (Alu) | MXI1 | Intron | 2 |
CP068268.2:113 205 090 | 315 | SINE (Alu) | GUCY2GP | Intron | 2 |
CP068268.2:113 289 049 | 328 | SINE (Alu) | ACSL5 | Intron | 2 |
CP068268.2:115 681 774 | 49 | Retroposon (SVA) | ABLIM1 | Intron | 2 |
CP068268.2:116 140 819 | 320 | SINE (Alu) | ATRNL1 | Intron | 2 |
CP068268.2:117 229 439 | 324 | SINE (Alu) | CCDC172 | Intron | 2 |
CP068268.2:119 905 022 | 318 | SINE (Alu) | LINC03036 | Intron | 2 |
CP068268.2:120 176 576 | 332 | SINE (Alu) | GRK5 | Intron | 2 |
CP068268.2:121 742 443 | 63 | LTR (ERV1) | WDR11-DT | Intron | 2 |
CP068268.2:128 286 207 | 314 | SINE (Alu) | DOCK1 | Intron | 2 |
CP068268.2:131 025 575 | 97 | LINE (L1) | C10orf143 | Intron | 2 |
CP068269.2:1 717 408 | 72 | SINE (Alu) | LOC105375951 | Intron | 2 |
CP068269.2:4 819 338 | 290 | SINE (Alu) | RCL1 | Intron | 2 |
CP068269.2:6 295 535 | 714 | LINE (L1) | LOC107987046 | Intron | 2 |
CP068269.2:9 145 491 | 321 | SINE (Alu) | PTPRD | Intron | 2 |
CP068269.2:10 470 782 | 315 | SINE (Alu) | PTPRD | Intron | 2 |
CP068269.2:18 597 553 | 6 097 | LINE (L1) | ADAMTSL1 | Intron | 2 |
CP068269.2:22 072 341 | 76 | SINE (Alu) | CDKN2B-AS1 | Intron | 1 |
CP068269.2:32 330 851 | 231 | SINE (Alu) | LOC107987059 | Intron | 2 |
CP068269.2:32 710 373 | 75 | Retroposon (SVA) | LOC105376017 | Intron | 2 |
CP068269.2:34 293 360 | 332 | SINE (Alu) | KIF24 | Intron | 2 |
CP068269.2:35 038 163 | 63 | LINE (L1) | LOC105376025 | Intron | 2 |
CP068269.2:76 857 935 | 69 | LINE (L1) | LOC124906851 | Intron | 2 |
CP068269.2:81 331 129 | 317 | SINE (Alu) | TJP2 | Intron | 2 |
CP068269.2:82 997 613 | 314 | SINE (Alu) | TRPM3 | Intron | 2 |
CP068269.2:83 458 461 | 325 | SINE (Alu) | TRPM3 | Intron | 2 |
CP068269.2:84 767 523 | 313 | SINE (Alu) | TMC1 | Intron | 2 |
CP068269.2:84 951 633 | 334 | SINE (Alu) | TMC1 | Intron | 2 |
CP068269.2:84 957 302 | 97 | Retroposon (SVA) | TMC1 | Intron | 2 |
CP068269.2:85 078 955 | 347 | SINE (Alu) | ALDH1A1 | Intron | 2 |
CP068269.2:88 222 509 | 407 | Retroposon (SVA) | PCSK5 | Intron | 2 |
CP068269.2:88 463 149 | 132 | SINE (MIR) | PCSK5 | Intron | 2 |
CP068269.2:88 992 783 | 326 | SINE (Alu) | PRUNE2 | Intron | 2 |
CP068269.2:91 626 241 | 3 768 | LINE (L1) | LOC124902328 | Intron | 2 |
CP068269.2:97 437 226 | 307 | SINE (Alu) | LOC105376119 | Intron | 2 |
CP068269.2:101 049 287 | 63 | LINE (L1) | LOC124902205 | Intron | 2 |
CP068269.2:102 597 254 | 306 | SINE (Alu) | LINC01508 | Intron | 2 |
CP068269.2:104 686 550 | 320 | SINE (Alu) | CENPP | Intron | 2 |
CP068269.2:106 136 047 | 250 | SINE (Alu) | LOC124902216 | Intron | 2 |
CP068269.2:106 794 432 | 314 | SINE (Alu) | FBP1 | Intron | 2 |
CP068269.2:110 499 969 | 327 | SINE (Alu) | GABBR2 | Intron | 2 |
CP068269.2:112 443 781 | 81 | SINE (Alu) | INVS | Intron | 2 |
CP068269.2:115 487 860 | 189 | SINE (Alu) | LINC01492 | Intron | 2 |
CP068269.2:119 632 661 | 61 | SINE (Alu) | LINC01509 | Intron | 2 |
CP068269.2:121 668 497 | 307 | SINE (Alu) | PTPN3 | Promoter | 2 |
CP068269.2:121 668 497 | 307 | SINE (Alu) | PTPN3 | Intron | 2 |
CP068269.2:124 278 134 | 326 | SINE (Alu) | SUSD1 | Intron | 2 |
CP068269.2:124 311 520 | 315 | SINE (Alu) | SUSD1 | Intron | 2 |
CP068269.2:124 685 972 | 226 | Retroposon (SVA) | KIAA1958 | Intron | 1 |
CP068269.2:124 686 231 | 175 | Retroposon (SVA) | KIAA1958 | Intron | 2 |
CP068269.2:127 358 271 | 292 | SINE (Alu) | DELEC1 | Intron | 2 |
CP068269.2:141 137 397 | 138 | SINE (Alu) | PHYHD1 | Intron | 2 |
CP068269.2:141 894 415 | 312 | SINE (Alu) | PRRX2 | Intron | 2 |
CP068269.2:144 740 730 | 2 979 | LINE (L1) | CFAP77 | Intron | 2 |
CP068269.2:146 110 857 | 226 | Retroposon (SVA) | VAV2 | Intron | 2 |
CP068269.2:194 449 | 321 | SINE (Alu) | LOC105375943 | Promoter | 2 |
CP068269.2:863 345 | 114 | Retroposon (SVA) | DMRT1 | Intron | 2 |
CP068270.2:3 524 025 | 329 | SINE (Alu) | CSMD1 | Intron | 2 |
CP068270.2:4 117 692 | 317 | SINE (Alu) | CSMD1 | Intron | 2 |
CP068270.2:4 348 134 | 95 | LINE (L1) | CSMD1 | Intron | 2 |
CP068270.2:5 725 123 | 607 | LINE (L1) | LOC105377795 | Intron | 2 |
CP068270.2:6 485 699 | 317 | SINE (Alu) | AGPAT5 | Intron | 2 |
CP068270.2:10 137 744 | 311 | SINE (Alu) | TNKS | Intron | 2 |
CP068270.2:10 681 512 | 322 | SINE (Alu) | ERI1 | Intron | 2 |
CP068270.2:11 544 378 | 70 | LTR (ERVK) | FAM85B | Intron | 1 |
CP068270.2:12 907 672 | 328 | SINE (Alu) | LOC729732 | Intron | 2 |
CP068270.2:13 365 524 | 315 | SINE (Alu) | DLC1 | Intron | 2 |
CP068270.2:15 385 820 | 222 | SINE (Alu) | SGCZ | Intron | 2 |
CP068270.2:17 372 585 | 320 | SINE (Alu) | MICU3 | Intron | 2 |
CP068270.2:17 675 688 | 331 | SINE (Alu) | MTMR7 | Intron | 2 |
CP068270.2:19 025 704 | 332 | SINE (Alu) | PSD3 | Intron | 2 |
CP068270.2:19 059 693 | 971 | LTR (ERVK) | PSD3 | Intron | 2 |
CP068270.2:26 048 555 | 112 | LINE (L1) | LOC107986933 | Intron | 2 |
CP068270.2:28 963 145 | 129 | LINE (L1) | EXTL3 | Promoter | 2 |
CP068270.2:28 963 145 | 129 | LINE (L1) | EXTL3 | Intron | 2 |
CP068270.2:31 665 091 | 335 | SINE (Alu) | LOC101929492 | Intron | 2 |
CP068270.2:32 796 257 | 198 | LINE (L1) | NRG1 | Intron | 2 |
CP068270.2:34 175 409 | 284 | SINE (Alu) | LOC105379364 | Intron | 2 |
CP068270.2:39 283 681 | 314 | SINE (Alu) | ADAM9 | Intron | 2 |
CP068270.2:42 456 695 | 311 | SINE (Alu) | PLAT | Intron | 2 |
CP068270.2:52 201 378 | 321 | SINE (Alu) | PCMTD1 | Intron | 2 |
CP068270.2:54 436 680 | 313 | SINE (Alu) | LYPLA1-TCEA1 | Intron | 2 |
CP068270.2:55 866 232 | 315 | SINE (Alu) | XKR4 | Intron | 2 |
CP068270.2:60 716 533 | 316 | SINE (Alu) | LOC105375864 | Intron | 2 |
CP068270.2:61 037 962 | 324 | SINE (Alu) | RAB2A | Intron | 2 |
CP068270.2:66 088 341 | 72 | Retroposon (SVA) | MTFR1 | Intron | 2 |
CP068270.2:66 658 372 | 175 | Retroposon (SVA) | LOC102724687 | Intron | 2 |
CP068270.2:70 055 900 | 116 | LTR (ERV1) | SULF1 | Intron | 2 |
CP068270.2:73 310 604 | 6 052 | LINE (L1) | KCNB2 | Intron | 2 |
CP068270.2:73 800 713 | 327 | SINE (Alu) | LOC105375899 | Promoter | 2 |
CP068270.2:74 052 032 | 172 | SINE (Alu) | STAU2 | Intron | 2 |
CP068270.2:74 150 241 | 330 | SINE (Alu) | STAU2 | Intron | 2 |
CP068270.2:76 854 880 | 1 041 | LINE (L1) | LINC01111 | Intron | 2 |
CP068270.2:80 270 047 | 319 | SINE (Alu) | LOC101927040 | Intron | 2 |
CP068270.2:81 286 924 | 314 | SINE (Alu) | ZNF704 | Intron | 2 |
CP068270.2:87 184 808 | 320 | SINE (Alu) | PSKH2 | Intron | 2 |
CP068270.2:87 814 335 | 147 | Retroposon (SVA) | CNGB3 | Promoter | 2 |
CP068270.2:87 814 335 | 147 | Retroposon (SVA) | CNGB3 | Intron | 2 |
CP068270.2:91 499 130 | 109 | LTR (ERVL) | LINC00534 | Intron | 2 |
CP068270.2:95 615 990 | 168 | SINE (Alu) | VIRMA | Intron | 2 |
CP068270.2:96 503 803 | 231 | SINE (Alu) | CFAP418-AS1 | Intron | 2 |
CP068270.2:96 580 482 | 314 | SINE (Alu) | CFAP418-AS1 | Intron | 2 |
CP068270.2:104 056 669 | 245 | Retroposon (SVA) | MAILR | Intron | 2 |
CP068270.2:106 786 176 | 326 | SINE (Alu) | ZFPM2 | Intron | 2 |
CP068270.2:107 844 447 | 325 | SINE (Alu) | OXR1 | Intron | 2 |
CP068270.2:110 217 896 | 322 | SINE (Alu) | TRHR | Intron | 2 |
CP068270.2:116 603 468 | 324 | SINE (Alu) | TRPS1 | Intron | 2 |
CP068270.2:117 806 203 | 718 | Retroposon (SVA) | EIF3H | Intron | 2 |
CP068270.2:121 797 875 | 317 | SINE (Alu) | SNTB1 | Intron | 2 |
CP068270.2:126 458 371 | 317 | SINE (Alu) | NSMCE2 | Intron | 2 |
CP068270.2:126 461 170 | 353 | SINE (Alu) | NSMCE2 | Intron | 2 |
CP068270.2:126 716 410 | 6 007 | LINE (L1) | LINC02964 | Intron | 2 |
CP068270.2:132 282 389 | 311 | SINE (Alu) | LOC105375760 | Intron | 2 |
CP068270.2:137 820 678 | 330 | SINE (Alu) | LINC02055 | Intron | 2 |
CP068270.2:138 964 925 | 319 | SINE (Alu) | LOC401478 | Intron | 2 |
CP068270.2:139 161 052 | 318 | SINE (Alu) | LOC401478 | Intron | 2 |
CP068271.2:2 382 174 | 77 | Retroposon (SVA) | SNX8 | Intron | 2 |
CP068271.2:2 674 652 | 107 | SINE (Alu) | IQCE | Intron | 2 |
CP068271.2:8 616 432 | 327 | SINE (Alu) | NXPH1 | Intron | 2 |
CP068271.2:15 262 062 | 60 | LTR (ERV1) | AGMO | Intron | 2 |
CP068271.2:15 556 034 | 134 | LTR (ERVL) | AGMO | Intron | 2 |
CP068271.2:18 412 782 | 280 | SINE (Alu) | HDAC9 | Intron | 2 |
CP068271.2:23 776 953 | 125 | Retroposon (SVA) | CCDC126 | Intron | 2 |
CP068271.2:26 303 990 | 119 | LINE (L1) | NFE2L3 | Intron | 2 |
CP068271.2:38 626 104 | 322 | SINE (Alu) | AMPH | Intron | 2 |
CP068271.2:38 630 323 | 333 | SINE (Alu) | AMPH | Intron | 2 |
CP068271.2:43 532 806 | 253 | SINE (Alu) | HECW1 | Intron | 2 |
CP068271.2:48 018 075 | 322 | SINE (Alu) | PKD1L1 | Intron | 2 |
CP068271.2:68 345 877 | 6 044 | LINE (L1) | TYW1 | Intron | 2 |
CP068271.2:68 364 737 | 319 | SINE (Alu) | TYW1 | Intron | 2 |
CP068271.2:79 769 073 | 328 | SINE (Alu) | MAGI2 | Intron | 2 |
CP068271.2:82 045 199 | 332 | SINE (Alu) | SEMA3C | Intron | 2 |
CP068271.2:84 052 406 | 316 | SINE (Alu) | PCLO | Intron | 2 |
CP068271.2:85 626 331 | 317 | SINE (Alu) | SEMA3A | Intron | 2 |
CP068271.2:86 363 451 | 306 | SINE (Alu) | SEMA3D | Intron | 2 |
CP068271.2:91 220 124 | 315 | SINE (Alu) | STEAP2-AS1 | Intron | 2 |
CP068271.2:91 992 921 | 206 | Retroposon (SVA) | CDK14 | Intron | 2 |
CP068271.2:93 363 499 | 316 | SINE (Alu) | CYP51A1 | Intron | 2 |
CP068271.2:96 385 566 | 326 | SINE (Alu) | PPP1R9A | Intron | 2 |
CP068271.2:98 667 750 | 315 | SINE (Alu) | LOC105375416 | Intron | 2 |
CP068271.2:102 681 693 | 2 777 | Retroposon (SVA) | COL26A1 | Intron | 2 |
CP068271.2:103 867 428 | 84 | SINE (Alu) | POLR2J3-UPK3BL2 | Intron | 2 |
CP068271.2:104 162 973 | 323 | SINE (Alu) | FAM185A | Intron | 2 |
CP068271.2:105 937 900 | 50 | SINE (Alu) | LHFPL3 | Intron | 2 |
CP068271.2:106 264 512 | 103 | SINE (Alu) | LOC101927902 | Intron | 2 |
CP068271.2:106 569 812 | 324 | SINE (Alu) | SRPK2 | Intron | 2 |
CP068271.2:112 163 030 | 97 | LINE (L1) | IMMP2L | Intron | 2 |
CP068271.2:115 628 405 | 310 | SINE (Alu) | FOXP2 | Intron | 2 |
CP068271.2:119 758 768 | 317 | SINE (Alu) | LOC105375471 | Intron | 2 |
CP068271.2:123 785 759 | 326 | SINE (Alu) | CADPS2 | Intron | 2 |
CP068271.2:124 629 | 227 | LINE (L1) | LOC105375112 | Intron | 2 |
CP068271.2:124 771 869 | 6 076 | LINE (L1) | IQUB | Intron | 2 |
CP068271.2:126 270 363 | 320 | SINE (Alu) | POT1-AS1 | Intron | 2 |
CP068271.2:126 339 965 | 167 | LTR (ERVL) | POT1-AS1 | Intron | 2 |
CP068271.2:129 073 083 | 320 | SINE (Alu) | SND1 | Intron | 2 |
CP068271.2:130 955 874 | 318 | SINE (Alu) | NRF1 | Intron | 2 |
CP068271.2:135 973 338 | 419 | LINE (L1) | BPGM | Intron | 2 |
CP068271.2:136 047 537 | 322 | SINE (Alu) | LOC124901750 | Intron | 2 |
CP068271.2:136 812 007 | 329 | SINE (Alu) | CNOT4 | Intron | 2 |
CP068271.2:138 459 439 | 302 | SINE (Alu) | LOC349160 | Intron | 2 |
CP068271.2:141 676 137 | 222 | Retroposon (SVA) | SLC37A3 | Intron | 2 |
CP068271.2:149 923 454 | 135 | SINE (Alu) | CUL1 | Intron | 2 |
CP068271.2:151 116 815 | 318 | SINE (Alu) | ACTR3C | Intron | 2 |
CP068271.2:152 533 887 | 143 | SINE (Alu) | NUB1 | Intron | 2 |
CP068271.2:156 495 059 | 305 | SINE (Alu) | LOC105375592 | Intron | 2 |
CP068271.2:158 746 778 | 338 | SINE (Alu) | PTPRN2 | Intron | 2 |
CP068272.2:2 841 255 | 305 | SINE (Alu) | SERPINB6 | Promoter | 2 |
CP068272.2:7 310 938 | 81 | LTR (ERV1) | LOC102724234 | Intron | 2 |
CP068272.2:9 939 215 | 313 | SINE (Alu) | OFCC1 | Intron | 2 |
CP068272.2:10 902 109 | 134 | SINE (Alu) | ELOVL2 | Intron | 2 |
CP068272.2:13 064 129 | 6 056 | LINE (L1) | PHACTR1 | Intron | 2 |
CP068272.2:13 394 506 | 328 | SINE (Alu) | RPS4XP7 | Promoter | 2 |
CP068272.2:15 288 747 | 48 | Retroposon (SVA) | JARID2 | Intron | 1 |
CP068272.2:15 288 768 | 50 | Retroposon (SVA) | JARID2 | Intron | 1 |
CP068272.2:17 288 249 | 320 | SINE (Alu) | CAP2 | Intron | 2 |
CP068272.2:19 027 502 | 326 | SINE (Alu) | LOC101928519 | Intron | 2 |
CP068272.2:20 041 064 | 314 | SINE (Alu) | MBOAT1 | Intron | 2 |
CP068272.2:24 682 785 | 5 931 | LINE (L1) | RIPOR2 | Intron | 2 |
CP068272.2:27 249 849 | 49 | LTR (ERV1) | ZNF391 | Intron | 1 |
CP068272.2:28 879 239 | 101 | SINE (Alu) | ZNF311 | Intron | 2 |
CP068272.2:29 603 853 | 2 300 | Retroposon (SVA) | HLA-F | Intron | 2 |
CP068272.2:29 841 615 | 316 | SINE (Alu) | HCG9 | Intron | 2 |
CP068272.2:31 265 398 | 84 | LINE (L1) | MICA | Intron | 2 |
CP068272.2:36 183 676 | 101 | LTR (ERV1) | ETV7 | Intron | 2 |
CP068272.2:38 355 201 | 136 | LTR (ERVK) | BTBD9 | Intron | 2 |
CP068272.2:38 778 843 | 313 | SINE (Alu) | DNAH8 | Intron | 2 |
CP068272.2:42 430 462 | 160 | SINE (Alu) | UBR2 | Intron | 2 |
CP068272.2:42 896 868 | 323 | SINE (Alu) | KLC4 | Intron | 2 |
CP068272.2:43 757 249 | 317 | SINE (Alu) | LINC01512 | Intron | 2 |
CP068272.2:45 835 182 | 326 | SINE (Alu) | CLIC5 | Intron | 2 |
CP068272.2:51 717 831 | 6 032 | LINE (L1) | PKHD1 | Intron | 2 |
CP068272.2:53 584 806 | 285 | SINE (Alu) | LOC124901334 | Intron | 2 |
CP068272.2:53 623 893 | 313 | SINE (Alu) | LOC124901333 | Intron | 2 |
CP068272.2:54 692 012 | 140 | SINE (Alu) | FAM83B | Intron | 2 |
CP068272.2:56 735 173 | 2 588 | Retroposon (SVA) | DST | Intron | 2 |
CP068272.2:57 438 109 | 310 | SINE (Alu) | PRIM2 | Intron | 2 |
CP068272.2:62 724 632 | 133 | SINE (Alu) | KHDRBS2 | Intron | 2 |
CP068272.2:66 607 855 | 309 | SINE (Alu) | EYS | Intron | 2 |
CP068272.2:70 300 658 | 76 | Retroposon (SVA) | ADGRB3 | Intron | 2 |
CP068272.2:74 889 500 | 315 | SINE (Alu) | CD109 | Intron | 2 |
CP068272.2:75 334 018 | 1 147 | LINE (L1) | LOC101928516 | Intron | 2 |
CP068272.2:75 805 446 | 326 | SINE (Alu) | LOC101928516 | Intron | 2 |
CP068272.2:76 483 619 | 49 | SINE (Alu) | FILIP1 | Intron | 2 |
CP068272.2:78 387 367 | 310 | SINE (Alu) | LOC101928570 | Intron | 2 |
CP068272.2:78 831 815 | 303 | SINE (Alu) | MEI4 | Intron | 2 |
CP068272.2:79 310 806 | 294 | SINE (Alu) | LOC105377865 | Intron | 2 |
CP068272.2:84 185 928 | 313 | SINE (Alu) | UBE3D | Intron | 2 |
CP068272.2:91 739 448 | 320 | SINE (Alu) | MAP3K7 | Intron | 2 |
CP068272.2:109 131 038 | 272 | Retroposon (SVA) | SEC63 | Intron | 1 |
CP068272.2:111 652 259 | 308 | SINE (Alu) | SLC22A16 | Intron | 2 |
CP068272.2:115 410 352 | 317 | SINE (Alu) | HDAC2-AS2 | Intron | 2 |
CP068272.2:117 169 353 | 290 | SINE (Alu) | FRK | Intron | 2 |
CP068272.2:123 028 920 | 103 | LINE (L2) | LOC105377979 | Intron | 2 |
CP068272.2:123 847 137 | 321 | SINE (Alu) | PKIB | Intron | 2 |
CP068272.2:125 365 522 | 320 | SINE (Alu) | NKAIN2 | Intron | 2 |
CP068272.2:127 291 111 | 314 | SINE (Alu) | TRMT11 | Intron | 2 |
CP068272.2:131 488 431 | 291 | SINE (Alu) | SAMD3 | Intron | 2 |
CP068272.2:132 049 393 | 316 | SINE (Alu) | EPB41L2 | Intron | 2 |
CP068272.2:132 292 270 | 943 | LINE (L1) | LOC102723445 | Intron | 2 |
CP068272.2:133 194 329 | 320 | SINE (Alu) | CCN2-AS1 | Intron | 2 |
CP068272.2:134 599 474 | 179 | SINE (Alu) | EYA4 | Intron | 2 |
CP068272.2:137 339 890 | 71 | SINE (Alu) | PDE7B | Intron | 2 |
CP068272.2:140 470 041 | 316 | SINE (Alu) | LOC102723690 | Intron | 2 |
CP068272.2:146 690 741 | 97 | LINE (L1) | EPM2A | Intron | 2 |
CP068272.2:149 677 325 | 283 | SINE (Alu) | SASH1 | Intron | 2 |
CP068272.2:155 567 174 | 275 | SINE (Alu) | LOC105378067 | Promoter | 2 |
CP068272.2:155 567 174 | 275 | SINE (Alu) | LOC105378067 | Intron | 2 |
CP068272.2:156 319 028 | 328 | SINE (Alu) | TIAM2 | Intron | 2 |
CP068272.2:157 199 315 | 305 | SINE (Alu) | LOC101928923 | Intron | 2 |
CP068272.2:158 278 908 | 328 | SINE (Alu) | ARID1B | Intron | 2 |
CP068272.2:159 990 424 | 318 | SINE (Alu) | SYTL3 | Intron | 2 |
CP068272.2:162 273 904 | 315 | SINE (Alu) | LOC105378093 | Intron | 2 |
CP068272.2:167 234 415 | 332 | SINE (Alu) | PDE10A | Intron | 2 |
CP068272.2:169 930 528 | 325 | SINE (Alu) | SMOC2 | Intron | 2 |
CP068273.2:1 857 117 | 309 | SINE (Alu) | LOC124901165 | Intron | 2 |
CP068273.2:3 418 493 | 320 | SINE (Alu) | LINC01019 | Intron | 2 |
CP068273.2:3 421 224 | 327 | SINE (Alu) | LINC01019 | Intron | 2 |
CP068273.2:7 785 055 | 312 | SINE (Alu) | CFAP90 | Intron | 2 |
CP068273.2:10 514 046 | 336 | SINE (Alu) | ANKRD33B | Intron | 2 |
CP068273.2:11 100 959 | 323 | SINE (Alu) | CTNND2 | Intron | 2 |
CP068273.2:13 357 466 | 56 | LINE (L1) | LOC105374660 | Intron | 2 |
CP068273.2:13 792 771 | 314 | SINE (Alu) | DNAH5 | Intron | 2 |
CP068273.2:13 832 228 | 313 | SINE (Alu) | DNAH5 | Intron | 2 |
CP068273.2:16 655 697 | 310 | SINE (Alu) | MYO10 | Intron | 2 |
CP068273.2:21 346 640 | 313 | SINE (Alu) | LOC102723561 | Intron | 2 |
CP068273.2:25 338 978 | 294 | SINE (Alu) | LINC02211 | Intron | 2 |
CP068273.2:33 917 310 | 6 058 | LINE (L1) | ADAMTS12 | Intron | 2 |
CP068273.2:34 235 086 | 320 | SINE (Alu) | C1QTNF3-AMACR | Intron | 2 |
CP068273.2:37 937 889 | 281 | SINE (Alu) | WDR70 | Intron | 2 |
CP068273.2:39 542 380 | 335 | SINE (Alu) | C9 | Intron | 2 |
CP068273.2:39 584 033 | 77 | Retroposon (SVA) | C9 | Intron | 2 |
CP068273.2:56 700 127 | 328 | SINE (Alu) | IL31RA | Intron | 2 |
CP068273.2:63 380 905 | 324 | SINE (Alu) | IPO11 | Intron | 2 |
CP068273.2:66 799 023 | 345 | Retroposon (SVA) | ERBIN | Intron | 2 |
CP068273.2:69 790 093 | 650 | LINE (L1) | LOC107984116 | Intron | 2 |
CP068273.2:77 456 269 | 295 | SINE (Alu) | CRHBP | Intron | 2 |
CP068273.2:77 524 535 | 147 | Retroposon (SVA) | AGGF1 | Intron | 2 |
CP068273.2:77 940 375 | 325 | SINE (Alu) | WDR41 | Intron | 2 |
CP068273.2:78 760 229 | 285 | SINE (Alu) | AP3B1 | Intron | 2 |
CP068273.2:79 463 339 | 318 | SINE (Alu) | ARSB | Intron | 2 |
CP068273.2:80 202 146 | 306 | SINE (Alu) | CMYA5 | Intron | 2 |
CP068273.2:83 675 995 | 305 | SINE (Alu) | XRCC4 | Intron | 2 |
CP068273.2:91 188 443 | 153 | SINE (Alu) | ADGRV1 | Intron | 2 |
CP068273.2:97 075 093 | 338 | SINE (Alu) | CAST | Intron | 2 |
CP068273.2:109 785 655 | 167 | LINE (L1) | LOC285638 | Intron | 2 |
CP068273.2:109 845 795 | 97 | Retroposon (SVA) | PJA2 | Intron | 2 |
CP068273.2:111 960 940 | 186 | SINE (Alu) | CAMK4 | Intron | 2 |
CP068273.2:118 013 084 | 305 | SINE (Alu) | LINC00992 | Intron | 2 |
CP068273.2:120 200 303 | 334 | SINE (Alu) | LOC348958 | Promoter | 2 |
CP068273.2:121 276 278 | 315 | SINE (Alu) | PRR16 | Intron | 2 |
CP068273.2:123 455 521 | 320 | SINE (Alu) | SNX24 | Intron | 2 |
CP068273.2:123 753 516 | 520 | LINE (L1) | TUBB8P11 | Intron | 2 |
CP068273.2:137 581 809 | 234 | LINE (L2) | SPOCK1 | Intron | 2 |
CP068273.2:138 669 937 | 65 | LTR (ERV1) | BRD8 | Intron | 2 |
CP068273.2:139 924 858 | 295 | SINE (Alu) | SPATA24 | Intron | 2 |
CP068273.2:147 526 118 | 317 | SINE (Alu) | PPP2R2B | Intron | 2 |
CP068273.2:156 396 451 | 314 | SINE (Alu) | SGCD | Intron | 2 |
CP068273.2:156 439 730 | 2 494 | LINE (L1) | SGCD | Intron | 2 |
CP068273.2:157 658 658 | 333 | SINE (Alu) | MED7 | Intron | 2 |
CP068273.2:158 900 045 | 254 | SINE (Alu) | LINC02227 | Intron | 2 |
CP068273.2:165 474 495 | 309 | SINE (Alu) | LINC03000 | Intron | 2 |
CP068273.2:168 283 846 | 321 | SINE (Alu) | TENM2 | Intron | 2 |
CP068273.2:171 270 546 | 85 | SINE (Alu) | KCNIP1 | Intron | 2 |
CP068273.2:173 656 926 | 118 | LINE (L1) | CREBRF | Intron | 1 |
CP068273.2:177 568 572 | 330 | SINE (Alu) | ZNF346 | Intron | 2 |
CP068273.2:178 279 547 | 169 | SINE (Alu) | FAM153A | Intron | 2 |
CP068273.2:180 497 165 | 147 | SINE (Alu) | RNF130 | Intron | 2 |
CP068273.2:180 746 045 | 174 | SINE (Alu) | RASGEF1C | Intron | 2 |
CP068273.2:181 478 951 | 321 | SINE (Alu) | BTNL8 | Intron | 2 |
CP068274.2:1 306 582 | 318 | SINE (Alu) | MAEA | Intron | 2 |
CP068274.2:2 568 818 | 317 | SINE (Alu) | FAM193A | Intron | 2 |
CP068274.2:4 004 477 | 80 | LTR (ERV1) | LOC105374359 | Intron | 2 |
CP068274.2:4 038 891 | 319 | SINE (Alu) | LOC101928217 | Intron | 2 |
CP068274.2:8 373 198 | 159 | SINE (Alu) | ACOX3 | Intron | 2 |
CP068274.2:9 950 436 | 248 | SINE (Alu) | SLC2A9 | Intron | 2 |
CP068274.2:9 954 701 | 316 | SINE (Alu) | SLC2A9 | Intron | 2 |
CP068274.2:14 937 064 | 114 | LTR (ERVL) | CPEB2-DT | Intron | 2 |
CP068274.2:15 773 375 | 496 | Retroposon (SVA) | CD38 | Intron | 2 |
CP068274.2:16 374 994 | 121 | Retroposon (SVA) | LOC105374505 | Intron | 2 |
CP068274.2:18 990 978 | 326 | SINE (Alu) | LOC107986263 | Intron | 2 |
CP068274.2:19 347 230 | 324 | SINE (Alu) | LINC02438 | Intron | 2 |
CP068274.2:36 292 569 | 314 | SINE (Alu) | DTHD1 | Intron | 2 |
CP068274.2:38 999 418 | 281 | SINE (Alu) | TMEM156 | Intron | 2 |
CP068274.2:39 378 562 | 322 | SINE (Alu) | KLB | Intron | 2 |
CP068274.2:39 675 502 | 162 | SINE (Alu) | UBE2K | Intron | 2 |
CP068274.2:40 853 100 | 322 | SINE (Alu) | APBB2 | Intron | 2 |
CP068274.2:41 023 194 | 133 | Retroposon (SVA) | APBB2 | Intron | 2 |
CP068274.2:57 036 762 | 320 | SINE (Alu) | LNX1 | Intron | 2 |
CP068274.2:58 993 922 | 318 | SINE (Alu) | CLOCK | Intron | 2 |
CP068274.2:59 545 992 | 196 | SINE (Alu) | CRACD | Intron | 2 |
CP068274.2:67 788 030 | 290 | SINE (Alu) | TECRL | Intron | 2 |
CP068274.2:71 614 671 | 317 | SINE (Alu) | TMPRSS11F | Intron | 2 |
CP068274.2:72 690 165 | 267 | LINE (L1) | TUBB8P11 | Intron | 2 |
CP068274.2:72 946 089 | 310 | SINE (Alu) | UGT2A2 | Intron | 2 |
CP068274.2:73 581 961 | 183 | LINE (L1) | CSN3 | Promoter | 2 |
CP068274.2:73 581 961 | 183 | LINE (L1) | CSN3 | Intron | 2 |
CP068274.2:75 446 974 | 318 | SINE (Alu) | NPFFR2 | Intron | 2 |
CP068274.2:79 413 317 | 316 | SINE (Alu) | ART3 | Intron | 2 |
CP068274.2:79 837 493 | 2 059 | Retroposon (SVA) | SHROOM3 | Intron | 2 |
CP068274.2:81 736 931 | 325 | SINE (Alu) | FRAS1 | Intron | 2 |
CP068274.2:82 894 257 | 83 | LTR (ERV1) | LINC00989 | Intron | 2 |
CP068274.2:83 041 340 | 58 | LINE (L1) | LOC105377302 | Intron | 2 |
CP068274.2:83 303 273 | 6 049 | LINE (L1) | ANTXR2 | Intron | 1 |
CP068274.2:85 588 188 | 304 | SINE (Alu) | LOC105377308 | Intron | 2 |
CP068274.2:88 878 813 | 314 | SINE (Alu) | ARHGAP24 | Intron | 2 |
CP068274.2:89 350 681 | 160 | LTR (ERV1) | MAPK10 | Intron | 2 |
CP068274.2:92 091 986 | 319 | SINE (Alu) | FAM13A | Intron | 2 |
CP068274.2:92 373 428 | 214 | SINE (Alu) | FAM13A | Intron | 2 |
CP068274.2:93 980 211 | 60 | LTR (ERVL) | CCSER1 | Intron | 2 |
CP068274.2:95 798 087 | 319 | SINE (Alu) | GRID2 | Intron | 2 |
CP068274.2:97 807 621 | 324 | SINE (Alu) | PDLIM5 | Intron | 2 |
CP068274.2:98 264 406 | 318 | SINE (Alu) | BMPR1B | Intron | 2 |
CP068274.2:99 966 112 | 319 | SINE (Alu) | LINC02267 | Intron | 2 |
CP068274.2:104 434 814 | 322 | SINE (Alu) | PPP3CA | Intron | 2 |
CP068274.2:105 736 347 | 1 888 | LINE (L1) | LOC105377621 | Intron | 2 |
CP068274.2:106 266 328 | 2 512 | LINE (L1) | SLC9B1 | Intron | 2 |
CP068274.2:120 081 692 | 904 | LINE (L1) | LOC107986306 | Intron | 2 |
CP068274.2:127 013 551 | 129 | LINE (L1) | LINC01091 | Intron | 2 |
CP068274.2:131 590 178 | 326 | SINE (Alu) | PGRMC2 | Intron | 2 |
CP068274.2:143 337 477 | 151 | SINE (Alu) | MAML3 | Intron | 2 |
CP068274.2:149 009 736 | 327 | Retroposon (SVA) | C4orf51 | Intron | 1 |
CP068274.2:149 208 720 | 318 | SINE (Alu) | ZNF827 | Promoter | 2 |
CP068274.2:149 208 720 | 318 | SINE (Alu) | ZNF827 | Intron | 2 |
CP068274.2:152 561 795 | 340 | SINE (Alu) | LINC02355 | Intron | 2 |
CP068274.2:153 696 602 | 318 | SINE (Alu) | LRBA | Intron | 2 |
CP068274.2:153 984 112 | 98 | Retroposon (SVA) | LRBA | Intron | 2 |
CP068274.2:154 538 668 | 126 | Retroposon (SVA) | SH3D19 | Intron | 2 |
CP068274.2:157 304 320 | 322 | SINE (Alu) | LOC101927947 | Intron | 2 |
CP068274.2:158 831 227 | 97 | SINE (Alu) | LOC105377505 | Intron | 2 |
CP068274.2:166 928 648 | 314 | SINE (Alu) | MARCHF1 | Intron | 2 |
CP068274.2:167 658 247 | 364 | LINE (L1) | MARCHF1 | Intron | 2 |
CP068274.2:168 615 609 | 326 | SINE (Alu) | KLHL2 | Intron | 2 |
CP068274.2:173 273 624 | 300 | SINE (Alu) | LOC105377530 | Intron | 2 |
CP068274.2:176 567 723 | 316 | SINE (Alu) | GALNT7 | Intron | 2 |
CP068274.2:177 952 805 | 327 | SINE (Alu) | LOC105377549 | Promoter | 2 |
CP068274.2:177 952 805 | 327 | SINE (Alu) | LOC105377549 | Intron | 2 |
CP068274.2:180 931 723 | 327 | SINE (Alu) | AGA-DT | Intron | 2 |
CP068274.2:183 743 146 | 134 | SINE (Alu) | LOC105377567 | Intron | 2 |
CP068274.2:183 970 626 | 314 | SINE (Alu) | LOC105377567 | Intron | 2 |
CP068274.2:184 287 159 | 177 | Retroposon (SVA) | LOC105377567 | Intron | 2 |
CP068274.2:188 770 995 | 325 | SINE (Alu) | CFAP96 | Intron | 2 |
CP068274.2:189 838 124 | 54 | SINE (Alu) | F11-AS1 | Intron | 2 |
CP068274.2:191 339 483 | 115 | Retroposon (SVA) | LOC124900881 | Intron | 2 |
CP068275.2:1 238 775 | 63 | LTR (ERV1) | CNTN6 | Intron | 2 |
CP068275.2:2 123 290 | 333 | SINE (Alu) | CNTN4 | Intron | 2 |
CP068275.2:2 584 962 | 312 | SINE (Alu) | CNTN4 | Intron | 2 |
CP068275.2:2 766 318 | 327 | SINE (Alu) | CNTN4 | Intron | 2 |
CP068275.2:7 082 643 | 330 | SINE (Alu) | GRM7 | Intron | 2 |
CP068275.2:7 119 340 | 309 | SINE (Alu) | GRM7 | Intron | 2 |
CP068275.2:11 482 481 | 294 | Retroposon (SVA) | ATG7 | Intron | 2 |
CP068275.2:12 308 634 | 309 | SINE (Alu) | PPARG | Intron | 2 |
CP068275.2:17 692 738 | 322 | SINE (Alu) | TBC1D5 | Intron | 2 |
CP068275.2:17 706 749 | 147 | Retroposon (SVA) | TBC1D5 | Intron | 2 |
CP068275.2:25 239 836 | 323 | SINE (Alu) | RARB | Intron | 2 |
CP068275.2:25 252 730 | 71 | LINE (L1) | RARB | Intron | 2 |
CP068275.2:28 128 297 | 325 | SINE (Alu) | LOC105377008 | Intron | 2 |
CP068275.2:29 475 804 | 159 | LTR (ERV1) | RBMS3 | Intron | 2 |
CP068275.2:29 581 534 | 322 | SINE (Alu) | RBMS3 | Intron | 2 |
CP068275.2:32 005 645 | 94 | LTR (ERV1) | OSBPL10 | Intron | 2 |
CP068275.2:32 394 273 | 251 | SINE (Alu) | CMTM7 | Intron | 2 |
CP068275.2:33 513 430 | 882 | LINE (L1) | CLASP2 | Intron | 2 |
CP068275.2:35 305 680 | 324 | SINE (Alu) | LOC101928135 | Intron | 2 |
CP068275.2:36 454 965 | 138 | LTR (ERV1) | STAC | Intron | 2 |
CP068275.2:37 564 342 | 320 | SINE (Alu) | ITGA9 | Intron | 2 |
CP068275.2:37 883 215 | 341 | SINE (Alu) | CTDSPL | Intron | 2 |
CP068275.2:38 085 680 | 299 | Retroposon (SVA) | DLEC1 | Intron | 2 |
CP068275.2:38 119 250 | 134 | SINE (Alu) | DLEC1 | Intron | 2 |
CP068275.2:41 321 655 | 61 | Retroposon (SVA) | ULK4 | Intron | 2 |
CP068275.2:45 150 159 | 318 | SINE (Alu) | CDCP1 | Intron | 2 |
CP068275.2:45 517 532 | 317 | SINE (Alu) | LARS2 | Intron | 2 |
CP068275.2:45 666 947 | 329 | SINE (Alu) | LIMD1 | Intron | 2 |
CP068275.2:46 636 445 | 321 | SINE (Alu) | FAM240A | Intron | 2 |
CP068275.2:47 760 449 | 318 | SINE (Alu) | SMARCC1 | Intron | 2 |
CP068275.2:48 737 575 | 324 | SINE (Alu) | IP6K2 | Intron | 2 |
CP068275.2:50 054 724 | 268 | SINE (Alu) | RBM6 | Intron | 2 |
CP068275.2:50 341 806 | 97 | Retroposon (SVA) | HYAL1 | Intron | 2 |
CP068275.2:50 871 694 | 344 | SINE (Alu) | DOCK3 | Intron | 2 |
CP068275.2:51 280 097 | 126 | Retroposon (SVA) | DOCK3 | Intron | 2 |
CP068275.2:57 489 207 | 486 | LTR (ERV1) | DNAH12 | Intron | 2 |
CP068275.2:57 618 834 | 310 | SINE (Alu) | PDE12 | Intron | 2 |
CP068275.2:59 950 161 | 108 | SINE (Alu) | FHIT | Intron | 2 |
CP068275.2:61 714 843 | 178 | Retroposon (SVA) | PTPRG | Intron | 2 |
CP068275.2:61 714 843 | 280 | Retroposon (SVA) | PTPRG | Intron | 2 |
CP068275.2:63 598 884 | 312 | SINE (Alu) | SYNPR | Intron | 2 |
CP068275.2:66 758 044 | 136 | SINE (Alu) | LOC105377142 | Intron | 2 |
CP068275.2:70 402 714 | 331 | SINE (Alu) | SAMMSON | Intron | 2 |
CP068275.2:71 229 921 | 299 | SINE (Alu) | FOXP1 | Intron | 2 |
CP068275.2:79 818 450 | 330 | SINE (Alu) | ROBO1 | Intron | 2 |
CP068275.2:80 595 596 | 6 100 | LINE (L1) | LOC105377177 | Intron | 2 |
CP068275.2:82 376 966 | 107 | LTR (ERV1) | LINC02008 | Intron | 2 |
CP068275.2:103 397 456 | 327 | SINE (Alu) | ADGRG7 | Intron | 2 |
CP068275.2:104 176 252 | 323 | SINE (Alu) | SENP7 | Intron | 2 |
CP068275.2:104 197 720 | 134 | SINE (Alu) | SENP7 | Intron | 2 |
CP068275.2:110 007 621 | 315 | SINE (Alu) | DUBR | Intron | 2 |
CP068275.2:114 228 328 | 335 | SINE (Alu) | LOC105374039 | Intron | 2 |
CP068275.2:114 926 706 | 49 | LINE (L1) | SLC9C1 | Intron | 2 |
CP068275.2:118 384 394 | 329 | SINE (Alu) | GAP43 | Intron | 2 |
CP068275.2:121 745 142 | 319 | SINE (Alu) | IGSF11 | Intron | 2 |
CP068275.2:124 569 921 | 314 | SINE (Alu) | EAF2 | Intron | 2 |
CP068275.2:125 800 969 | 326 | SINE (Alu) | PDIA5 | Intron | 2 |
CP068275.2:127 093 813 | 499 | Retroposon (SVA) | KALRN | Intron | 2 |
CP068275.2:127 413 483 | 316 | SINE (Alu) | KALRN | Intron | 2 |
CP068275.2:128 503 270 | 308 | SINE (Alu) | TUBB8P11 | Intron | 2 |
CP068275.2:129 372 854 | 325 | SINE (Alu) | TXNRD3 | Intron | 2 |
CP068275.2:132 210 422 | 310 | SINE (Alu) | IFT122 | Intron | 2 |
CP068275.2:145 488 419 | 314 | SINE (Alu) | TRPC1 | Intron | 2 |
CP068275.2:145 833 710 | 401 | Retroposon (SVA) | LOC105374138 | Intron | 2 |
CP068275.2:148 980 021 | 50 | LTR (ERV1) | PLSCR4 | Intron | 2 |
CP068275.2:151 234 711 | 261 | LINE (L1) | LOC105374150 | Intron | 2 |
CP068275.2:152 131 585 | 98 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 2 |
CP068275.2:152 131 588 | 850 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 2 |
CP068275.2:152 131 779 | 254 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 2 |
CP068275.2:158 441 944 | 179 | SINE (Alu) | PLCH1 | Intron | 2 |
CP068275.2:160 210 863 | 323 | SINE (Alu) | PTX3 | Promoter | 2 |
CP068275.2:160 210 863 | 323 | SINE (Alu) | VEPH1 | Intron | 2 |
CP068275.2:161 020 241 | 339 | SINE (Alu) | RSRC1 | Intron | 2 |
CP068275.2:163 320 669 | 161 | SINE (Alu) | KPNA4 | Intron | 2 |
CP068275.2:171 265 169 | 319 | SINE (Alu) | EGFEM1P | Intron | 2 |
CP068275.2:174 692 725 | 313 | SINE (Alu) | LOC105374218 | Intron | 2 |
CP068275.2:175 390 208 | 142 | SINE (Alu) | SLC31A1P1 | Promoter | 2 |
CP068275.2:175 468 147 | 318 | SINE (Alu) | NCEH1 | Intron | 2 |
CP068275.2:177 480 228 | 322 | SINE (Alu) | NAALADL2 | Intron | 2 |
CP068275.2:181 925 312 | 67 | Retroposon (SVA) | PIK3CA-DT | Intron | 2 |
CP068275.2:190 057 581 | 329 | SINE (Alu) | MASP1 | Intron | 2 |
CP068275.2:200 460 370 | 71 | SINE (Alu) | RUBCN | Intron | 2 |
CP068276.2:1 142 774 | 282 | SINE (Alu) | SNTG2 | Intron | 2 |
CP068276.2:1 468 423 | 331 | SINE (Alu) | TPO | Intron | 2 |
CP068276.2:10 715 943 | 158 | LINE (L2) | NOL10 | Intron | 2 |
CP068276.2:15 643 219 | 126 | Retroposon (SVA) | DDX1 | Intron | 2 |
CP068276.2:25 039 473 | 315 | SINE (Alu) | DNAJC27-AS1 | Intron | 2 |
CP068276.2:27 874 359 | 323 | SINE (Alu) | RBKS | Intron | 2 |
CP068276.2:28 174 642 | 325 | SINE (Alu) | BABAM2 | Intron | 2 |
CP068276.2:32 189 307 | 322 | SINE (Alu) | SPAST | Intron | 2 |
CP068276.2:34 078 377 | 317 | SINE (Alu) | LINC01317 | Intron | 2 |
CP068276.2:40 395 538 | 329 | SINE (Alu) | SLC8A1 | Intron | 2 |
CP068276.2:44 594 088 | 225 | Retroposon (SVA) | CAMKMT | Intron | 1 |
CP068276.2:44 604 010 | 317 | SINE (Alu) | CAMKMT | Intron | 2 |
CP068276.2:47 587 887 | 2 883 | Retroposon (SVA) | MSH2 | Intron | 2 |
CP068276.2:47 961 973 | 134 | SINE (Alu) | LOC105374591 | Intron | 2 |
CP068276.2:48 560 596 | 2 686 | Retroposon (SVA) | STON1-GTF2A1L | Intron | 2 |
CP068276.2:50 018 018 | 133 | SINE (Alu) | NRXN1 | Intron | 2 |
CP068276.2:51 765 172 | 311 | SINE (Alu) | NRXN1-DT | Intron | 2 |
CP068276.2:53 161 221 | 64 | LINE (L1) | LOC105369165 | Intron | 2 |
CP068276.2:54 460 543 | 253 | SINE (Alu) | SPTBN1 | Promoter | 2 |
CP068276.2:54 460 543 | 253 | SINE (Alu) | SPTBN1 | Intron | 2 |
CP068276.2:56 143 345 | 319 | SINE (Alu) | LOC105374690 | Intron | 2 |
CP068276.2:56 642 726 | 165 | SINE (Alu) | LOC101927213 | Intron | 2 |
CP068276.2:62 280 995 | 317 | SINE (Alu) | LOC105374761 | Intron | 2 |
CP068276.2:63 716 688 | 81 | SINE (Alu) | WDPCP | Intron | 2 |
CP068276.2:65 116 309 | 306 | SINE (Alu) | RAB1A | Intron | 2 |
CP068276.2:69 529 836 | 325 | SINE (Alu) | AAK1 | Intron | 2 |
CP068276.2:74 070 032 | 351 | Retroposon (SVA) | TET3 | Intron | 2 |
CP068276.2:74 292 982 | 328 | SINE (Alu) | SLC4A5 | Intron | 2 |
CP068276.2:80 542 014 | 270 | SINE (Alu) | CTNNA2 | Intron | 2 |
CP068276.2:81 704 371 | 312 | SINE (Alu) | LOC102724542 | Intron | 2 |
CP068276.2:81 714 488 | 335 | SINE (Alu) | LOC102724542 | Intron | 2 |
CP068276.2:88 741 786 | 3 045 | LINE (L1) | RPIA | Intron | 2 |
CP068276.2:98 423 896 | 304 | SINE (Alu) | TMEM131 | Intron | 2 |
CP068276.2:102 198 725 | 316 | SINE (Alu) | MAP4K4 | Intron | 2 |
CP068276.2:103 165 040 | 333 | SINE (Alu) | SLC9A2 | Intron | 2 |
CP068276.2:107 771 785 | 321 | SINE (Alu) | LINC01789 | Intron | 2 |
CP068276.2:112 385 913 | 326 | SINE (Alu) | MERTK | Intron | 2 |
CP068276.2:128 316 576 | 322 | SINE (Alu) | AMMECR1L | Intron | 2 |
CP068276.2:131 521 066 | 319 | SINE (Alu) | FAM168B | Intron | 2 |
CP068276.2:133 554 578 | 318 | SINE (Alu) | NCKAP5 | Intron | 2 |
CP068276.2:141 752 388 | 57 | LINE (L1) | LRP1B | Intron | 2 |
CP068276.2:141 802 818 | 332 | SINE (Alu) | LRP1B | Intron | 2 |
CP068276.2:148 342 955 | 298 | SINE (Alu) | ACVR2A | Intron | 2 |
CP068276.2:150 220 893 | 319 | SINE (Alu) | MMADHC-DT | Intron | 2 |
CP068276.2:153 756 655 | 321 | SINE (Alu) | GALNT13 | Intron | 2 |
CP068276.2:156 904 306 | 49 | Retroposon (SVA) | GPD2 | Intron | 2 |
CP068276.2:158 030 254 | 326 | SINE (Alu) | ACVR1C | Intron | 2 |
CP068276.2:159 710 998 | 156 | SINE (Alu) | WDSUB1 | Intron | 2 |
CP068276.2:160 457 569 | 319 | SINE (Alu) | PLA2R1 | Intron | 2 |
CP068276.2:163 278 969 | 310 | SINE (Alu) | KCNH7 | Intron | 2 |
CP068276.2:169 207 167 | 75 | SINE (Alu) | CERS6 | Intron | 2 |
CP068276.2:169 505 778 | 318 | SINE (Alu) | ABCB11 | Intron | 2 |
CP068276.2:174 714 647 | 320 | SINE (Alu) | OLA1 | Intron | 2 |
CP068276.2:175 359 957 | 318 | SINE (Alu) | CHN1 | Intron | 2 |
CP068276.2:177 936 293 | 332 | SINE (Alu) | AGPS | Intron | 2 |
CP068276.2:177 969 024 | 339 | SINE (Alu) | AGPS | Intron | 2 |
CP068276.2:181 505 642 | 310 | SINE (Alu) | UBE2E3 | Intron | 2 |
CP068276.2:181 887 945 | 307 | SINE (Alu) | LINC01934 | Intron | 2 |
CP068276.2:182 940 161 | 312 | SINE (Alu) | PDE1A | Intron | 2 |
CP068276.2:187 840 213 | 316 | SINE (Alu) | CALCRL-AS1 | Intron | 2 |
CP068276.2:188 787 065 | 297 | SINE (Alu) | GULP1 | Intron | 2 |
CP068276.2:191 887 362 | 478 | Retroposon (SVA) | MYO1B | Intron | 2 |
CP068276.2:196 356 056 | 274 | SINE (Alu) | DNAH7 | Intron | 2 |
CP068276.2:198 513 690 | 136 | SINE (Alu) | PLCL1 | Intron | 2 |
CP068276.2:201 256 725 | 968 | LINE (L1) | AOX3P-AOX2P | Intron | 2 |
CP068276.2:201 765 374 | 3 154 | Retroposon (SVA) | CASP8 | Intron | 2 |
CP068276.2:202 258 175 | 325 | SINE (Alu) | ALS2 | Intron | 2 |
CP068276.2:207 594 378 | 322 | SINE (Alu) | KLF7 | Intron | 2 |
CP068276.2:208 081 694 | 315 | SINE (Alu) | METTL21A | Intron | 2 |
CP068276.2:209 066 826 | 324 | SINE (Alu) | LOC101927960 | Intron | 2 |
CP068276.2:213 593 201 | 342 | SINE (Alu) | IKZF2 | Intron | 2 |
CP068276.2:214 127 683 | 244 | SINE (Alu) | SPAG16 | Intron | 2 |
CP068276.2:214 395 182 | 306 | SINE (Alu) | SPAG16 | Intron | 2 |
CP068276.2:215 319 684 | 77 | Retroposon (SVA) | SNHG31 | Intron | 2 |
CP068276.2:215 369 783 | 158 | SINE (Alu) | SNHG31 | Intron | 2 |
CP068276.2:216 169 155 | 326 | SINE (Alu) | LOC102724861 | Intron | 2 |
CP068276.2:216 174 633 | 133 | SINE (Alu) | LOC102724861 | Intron | 1 |
CP068276.2:217 798 533 | 319 | SINE (Alu) | DIRC3-AS1 | Intron | 2 |
CP068276.2:219 198 425 | 326 | SINE (Alu) | TTLL4 | Intron | 2 |
CP068276.2:224 009 725 | 146 | SINE (Alu) | LOC105373907 | Intron | 2 |
CP068276.2:226 634 805 | 245 | SINE (Alu) | LOC646736 | Intron | 2 |
CP068276.2:233 687 447 | 149 | SINE (Alu) | INPP5D | Intron | 2 |
CP068276.2:234 212 774 | 50 | Retroposon (SVA) | UGT1A8 | Intron | 2 |
CP068277.2:1 320 292 | 328 | SINE (Alu) | GNB1 | Intron | 2 |
CP068277.2:6 326 450 | 177 | SINE (Alu) | CAMTA1 | Promoter | 2 |
CP068277.2:6 326 450 | 177 | SINE (Alu) | CAMTA1 | Intron | 2 |
CP068277.2:7 334 478 | 181 | SINE (Alu) | PER3 | Intron | 2 |
CP068277.2:7 919 417 | 313 | SINE (Alu) | RERE | Intron | 2 |
CP068277.2:14 607 684 | 135 | SINE (Alu) | TMEM51 | Intron | 2 |
CP068277.2:17 172 541 | 322 | SINE (Alu) | PADI4 | Intron | 2 |
CP068277.2:20 992 773 | 316 | SINE (Alu) | EIF4G3 | Intron | 2 |
CP068277.2:26 742 097 | 320 | SINE (Alu) | NUDC | Intron | 2 |
CP068277.2:28 942 968 | 322 | SINE (Alu) | EPB41 | Intron | 2 |
CP068277.2:37 704 316 | 337 | SINE (Alu) | MTF1 | Intron | 2 |
CP068277.2:38 352 287 | 74 | SINE (Alu) | LOC105378657 | Intron | 2 |
CP068277.2:43 651 450 | 2 612 | Retroposon (SVA) | ST3GAL3 | Intron | 2 |
CP068277.2:45 201 578 | 326 | SINE (Alu) | MUTYH | Intron | 2 |
CP068277.2:46 090 577 | 335 | SINE (Alu) | LURAP1 | Intron | 2 |
CP068277.2:50 326 587 | 333 | SINE (Alu) | FAF1 | Intron | 2 |
CP068277.2:56 248 453 | 3 850 | LINE (L1) | LOC124905710 | Intron | 2 |
CP068277.2:56 301 172 | 313 | SINE (Alu) | LOC124905710 | Intron | 2 |
CP068277.2:57 484 949 | 211 | SINE (Alu) | DAB1 | Intron | 2 |
CP068277.2:59 284 566 | 319 | SINE (Alu) | FGGY | Intron | 2 |
CP068277.2:61 803 773 | 316 | SINE (Alu) | PATJ | Intron | 2 |
CP068277.2:64 759 246 | 333 | SINE (Alu) | JAK1 | Intron | 2 |
CP068277.2:65 321 913 | 268 | LINE (L1) | LEPR | Intron | 2 |
CP068277.2:65 467 967 | 315 | SINE (Alu) | LEPR | Intron | 2 |
CP068277.2:66 613 403 | 328 | SINE (Alu) | SGIP1 | Intron | 2 |
CP068277.2:69 355 344 | 307 | SINE (Alu) | LOC105378789 | Intron | 2 |
CP068277.2:69 502 005 | 149 | LINE (L1) | LRRC7 | Intron | 2 |
CP068277.2:74 568 854 | 3 708 | LINE (L1) | CRYZ | Intron | 2 |
CP068277.2:76 228 904 | 312 | SINE (Alu) | ST6GALNAC3 | Intron | 2 |
CP068277.2:76 950 407 | 328 | SINE (Alu) | PIGK | Intron | 2 |
CP068277.2:77 006 803 | 316 | SINE (Alu) | PIGK | Intron | 2 |
CP068277.2:77 980 174 | 317 | SINE (Alu) | LOC107984997 | Intron | 2 |
CP068277.2:81 683 953 | 322 | SINE (Alu) | ADGRL2 | Intron | 2 |
CP068277.2:82 984 354 | 1 742 | LINE (L1) | LINC01362 | Intron | 2 |
CP068277.2:86 739 975 | 127 | Retroposon (SVA) | SELENOF | Intron | 2 |
CP068277.2:89 748 218 | 268 | SINE (Alu) | LRRC8D | Intron | 2 |
CP068277.2:99 934 205 | 314 | SINE (Alu) | SASS6 | Intron | 2 |
CP068277.2:107 637 360 | 308 | SINE (Alu) | VAV3 | Intron | 2 |
CP068277.2:110 016 088 | 218 | SINE (Alu) | AHCYL1 | Intron | 2 |
CP068277.2:111 310 361 | 61 | LINE (L1) | CHIA | Intron | 2 |
CP068277.2:111 595 921 | 320 | SINE (Alu) | RAP1A | Intron | 2 |
CP068277.2:114 512 654 | 311 | SINE (Alu) | TRIM33 | Intron | 2 |
CP068277.2:114 670 214 | 304 | SINE (Alu) | DENND2C | Intron | 2 |
CP068277.2:117 439 865 | 79 | Retroposon (SVA) | MAN1A2 | Intron | 2 |
CP068277.2:117 557 840 | 221 | SINE (Alu) | VPS25P1 | Promoter | 2 |
CP068277.2:152 298 029 | 256 | LINE (L1) | SPRR2G | Intron | 2 |
CP068277.2:155 092 707 | 320 | SINE (Alu) | ARHGEF2 | Intron | 2 |
CP068277.2:156 402 821 | 137 | SINE (Alu) | LOC105371456 | Intron | 2 |
CP068277.2:165 036 498 | 272 | SINE (Alu) | ALDH9A1 | Intron | 2 |
CP068277.2:166 450 102 | 62 | LTR (ERVL) | STYXL2 | Intron | 2 |
CP068277.2:170 038 643 | 96 | SINE (Alu) | PRRX1 | Intron | 2 |
CP068277.2:178 877 823 | 353 | SINE (Alu) | AXDND1 | Intron | 2 |
CP068277.2:180 056 924 | 281 | LINE (L1) | XPR1 | Intron | 2 |
CP068277.2:181 811 277 | 323 | SINE (Alu) | RGSL1 | Intron | 2 |
CP068277.2:188 371 799 | 328 | SINE (Alu) | LINC01035 | Intron | 2 |
CP068277.2:191 194 817 | 318 | SINE (Alu) | LINC02770 | Intron | 2 |
CP068277.2:196 178 912 | 323 | SINE (Alu) | CFHR4 | Intron | 2 |
CP068277.2:203 533 894 | 317 | SINE (Alu) | PLEKHA6 | Intron | 2 |
CP068277.2:209 360 883 | 317 | SINE (Alu) | SYT14 | Intron | 2 |
CP068277.2:209 987 125 | 121 | SINE (Alu) | LOC105372901 | Intron | 2 |
CP068277.2:210 357 650 | 119 | Retroposon (SVA) | KCNH1 | Intron | 1 |
CP068277.2:211 713 734 | 85 | SINE (Alu) | LINC02771 | Intron | 2 |
CP068277.2:211 837 436 | 315 | SINE (Alu) | ATF3 | Intron | 2 |
CP068277.2:214 261 398 | 54 | LTR (ERVL) | KCNK2 | Intron | 2 |
CP068277.2:214 351 830 | 317 | SINE (Alu) | KCNK2 | Intron | 2 |
CP068277.2:216 139 844 | 330 | SINE (Alu) | ESRRG | Intron | 2 |
CP068277.2:217 069 272 | 325 | SINE (Alu) | SPATA17 | Intron | 2 |
CP068277.2:218 986 191 | 318 | SINE (Alu) | LOC105372926 | Intron | 2 |
CP068277.2:220 020 709 | 318 | SINE (Alu) | MTARC2 | Intron | 2 |
CP068277.2:221 722 389 | 173 | Retroposon (SVA) | LOC124905750 | Intron | 1 |
CP068277.2:221 931 096 | 328 | SINE (Alu) | AIDA | Intron | 2 |
CP068277.2:222 361 090 | 330 | SINE (Alu) | TLR5 | Intron | 2 |
CP068277.2:226 463 590 | 323 | SINE (Alu) | CDC42BPA | Intron | 2 |
CP068277.2:226 503 107 | 134 | SINE (Alu) | CDC42BPA | Intron | 2 |
CP068277.2:230 329 881 | 305 | SINE (Alu) | TTC13 | Intron | 2 |
CP068277.2:232 592 710 | 314 | SINE (Alu) | PCNX2 | Intron | 2 |
CP068277.2:233 657 577 | 51 | Retroposon (SVA) | SLC35F3 | Intron | 2 |
CP068277.2:235 777 228 | 2 105 | Retroposon (SVA) | EDARADD | Intron | 2 |
CP068277.2:239 055 414 | 282 | LINE (L1) | CHRM3 | Intron | 2 |
CP068277.2:242 625 619 | 323 | SINE (Alu) | CEP170 | Intron | 2 |
CP068277.2:245 851 672 | 318 | SINE (Alu) | SMYD3 | Intron | 2 |
CP068277.2:246 075 792 | 133 | SINE (Alu) | CNST | Intron | 2 |
CP068277.2:246 295 973 | 301 | SINE (Alu) | AHCTF1 | Intron | 2 |
CP068277.2:981 392 | 121 | SINE (Alu) | SSU72 | Intron | 2 |
Position | Length | Type | Gene | Annotation | Occurrences |
|---|---|---|---|---|---|
CP068258.2:1 634 244 | 147 | DNA (hAT) | SIRPB1 | Intron | 1 |
CP068258.2:55 000 758 | 56 | DNA (hAT) | TSHZ2 | Intron | 1 |
CP068259.2:41 706 549 | 82 | DNA (hAT) | NFKBIB | Intron | 2 |
CP068262.2:71 260 009 | 200 | DNA (TcMar) | LINC00922 | Intron | 2 |
CP068268.2:29 625 324 | 54 | DNA (TcMar) | SVIL | Intron | 2 |
CP068268.2:35 402 487 | 112 | DNA (TcMar) | CCNY | Intron | 2 |
CP068269.2:19 135 332 | 63 | DNA (TcMar) | PLIN2 | Intron | 2 |
CP068270.2:1 952 883 | 263 | DNA (hAT) | LOC105377781 | Intron | 2 |
CP068270.2:8 712 615 | 74 | DNA (TcMar) | XKR6 | Intron | 2 |
CP068270.2:89 463 045 | 96 | DNA (hAT) | LOC105375630 | Intron | 2 |
CP068272.2:167 189 769 | 54 | DNA (TcMar) | PDE10A | Intron | 1 |
CP068277.2:239 923 756 | 176 | DNA (hAT) | GREM2 | Intron | 2 |
It is common to find deletions whose coordinates match those of a TE sequence in the reference genome. This section presents them.
Allele frequency is shown for TE deletions for each chromosome. Each dot marks a different deletion.
This section shows the result of enrichment analysis on the genes affected with TE insertions.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is glucuronosyltransferase activity (0.0001476274), and the highest (among the lowest 10) is phosphatidylinositol binding (0.003421468). The ratio is 23.17637, i.e., they differ in 1 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0015020 | glucuronosyltransferase activity | 10/738 | 36/20758 | 3.336e-07 | 0.0001476 | 0.0001339 | 10 | 0.01355 |
GO:0071889 | 14-3-3 protein binding | 10/738 | 37/20758 | 4.427e-07 | 0.0001476 | 0.0001339 | 10 | 0.01355 |
GO:0005543 | phospholipid binding | 41/738 | 495/20758 | 5.114e-07 | 0.0001476 | 0.0001339 | 41 | 0.05556 |
GO:0046979 | TAP2 binding | 7/738 | 20/20758 | 3.608e-06 | 0.0007812 | 0.0007084 | 7 | 0.009485 |
GO:0005516 | calmodulin binding | 21/738 | 210/20758 | 2.055e-05 | 0.003144 | 0.002851 | 21 | 0.02846 |
GO:0005216 | ion channel activity | 36/738 | 480/20758 | 2.27e-05 | 0.003144 | 0.002851 | 36 | 0.04878 |
GO:0030881 | beta-2-microglobulin binding | 7/738 | 26/20758 | 2.541e-05 | 0.003144 | 0.002851 | 7 | 0.009485 |
GO:0051959 | dynein light intermediate chain binding | 7/738 | 27/20758 | 3.326e-05 | 0.003421 | 0.003102 | 7 | 0.009485 |
GO:0008569 | minus-end-directed microtubule motor activity | 6/738 | 19/20758 | 3.61e-05 | 0.003421 | 0.003102 | 6 | 0.00813 |
GO:0035091 | phosphatidylinositol binding | 25/738 | 288/20758 | 3.951e-05 | 0.003421 | 0.003102 | 25 | 0.03388 |
GO:0046978 | TAP1 binding | 7/738 | 29/20758 | 5.494e-05 | 0.004325 | 0.003922 | 7 | 0.009485 |
GO:0016757 | glycosyltransferase activity | 24/738 | 289/20758 | 0.0001119 | 0.008075 | 0.007322 | 24 | 0.03252 |
GO:0008194 | UDP-glycosyltransferase activity | 16/738 | 157/20758 | 0.0001548 | 0.01031 | 0.00935 | 16 | 0.02168 |
GO:0016758 | hexosyltransferase activity | 19/738 | 210/20758 | 0.0001903 | 0.01061 | 0.009625 | 19 | 0.02575 |
GO:0005080 | protein kinase C binding | 9/738 | 58/20758 | 0.0001932 | 0.01061 | 0.009625 | 9 | 0.0122 |
GO:0045296 | cadherin binding | 27/738 | 357/20758 | 0.0002038 | 0.01061 | 0.009625 | 27 | 0.03659 |
GO:0042578 | phosphoric ester hydrolase activity | 29/738 | 396/20758 | 0.0002084 | 0.01061 | 0.009625 | 29 | 0.0393 |
GO:0005096 | GTPase activator activity | 24/738 | 304/20758 | 0.0002405 | 0.01157 | 0.01049 | 24 | 0.03252 |
GO:0046873 | metal ion transmembrane transporter activity | 32/738 | 466/20758 | 0.0003188 | 0.01453 | 0.01317 | 32 | 0.04336 |
GO:0003779 | actin binding | 32/738 | 471/20758 | 0.0003839 | 0.01614 | 0.01464 | 32 | 0.04336 |
GO:0022836 | gated channel activity | 27/738 | 372/20758 | 0.0003914 | 0.01614 | 0.01464 | 27 | 0.03659 |
GO:0005085 | guanyl-nucleotide exchange factor activity | 20/738 | 245/20758 | 0.0005051 | 0.01924 | 0.01745 | 20 | 0.0271 |
GO:0005261 | cation channel activity | 26/738 | 360/20758 | 0.0005361 | 0.01924 | 0.01745 | 26 | 0.03523 |
GO:0015085 | calcium ion transmembrane transporter activity | 14/738 | 142/20758 | 0.0005486 | 0.01924 | 0.01745 | 14 | 0.01897 |
GO:0005262 | calcium channel activity | 13/738 | 126/20758 | 0.0005554 | 0.01924 | 0.01745 | 13 | 0.01762 |
GO:0098632 | cell-cell adhesion mediator activity | 8/738 | 54/20758 | 0.0006015 | 0.02004 | 0.01817 | 8 | 0.01084 |
GO:0005001 | transmembrane receptor protein tyrosine phosphatase activity | 5/738 | 21/20758 | 0.0007095 | 0.02194 | 0.0199 | 5 | 0.006775 |
GO:0019198 | transmembrane receptor protein phosphatase activity | 5/738 | 21/20758 | 0.0007095 | 0.02194 | 0.0199 | 5 | 0.006775 |
GO:0003774 | cytoskeletal motor activity | 12/738 | 118/20758 | 0.001017 | 0.03037 | 0.02754 | 12 | 0.01626 |
GO:0070679 | inositol 1,4,5 trisphosphate binding | 4/738 | 14/20758 | 0.001193 | 0.03443 | 0.03122 | 4 | 0.00542 |
GO:0046977 | TAP binding | 7/738 | 50/20758 | 0.001842 | 0.05075 | 0.04602 | 7 | 0.009485 |
GO:0098631 | cell adhesion mediator activity | 8/738 | 64/20758 | 0.001875 | 0.05075 | 0.04602 | 8 | 0.01084 |
GO:0046703 | natural killer cell lectin-like receptor binding | 5/738 | 27/20758 | 0.00236 | 0.06193 | 0.05615 | 5 | 0.006775 |
GO:0016791 | phosphatase activity | 21/738 | 300/20758 | 0.002573 | 0.06445 | 0.05844 | 21 | 0.02846 |
GO:0015385 | sodium:proton antiporter activity | 4/738 | 17/20758 | 0.002605 | 0.06445 | 0.05844 | 4 | 0.00542 |
GO:0015278 | calcium-release channel activity | 4/738 | 18/20758 | 0.003256 | 0.07663 | 0.06948 | 4 | 0.00542 |
GO:0045499 | chemorepellent activity | 5/738 | 29/20758 | 0.003274 | 0.07663 | 0.06948 | 5 | 0.006775 |
GO:1901981 | phosphatidylinositol phosphate binding | 15/738 | 191/20758 | 0.003511 | 0.08001 | 0.07255 | 15 | 0.02033 |
GO:0003777 | microtubule motor activity | 8/738 | 72/20758 | 0.003959 | 0.08578 | 0.07779 | 8 | 0.01084 |
GO:0004675 | transmembrane receptor protein serine/threonine kinase activity | 4/738 | 19/20758 | 0.004009 | 0.08578 | 0.07779 | 4 | 0.00542 |
GO:0004721 | phosphoprotein phosphatase activity | 15/738 | 194/20758 | 0.004061 | 0.08578 | 0.07779 | 15 | 0.02033 |
GO:0005217 | intracellular ligand-gated ion channel activity | 5/738 | 31/20758 | 0.004418 | 0.08969 | 0.08133 | 5 | 0.006775 |
GO:0032356 | oxidized DNA binding | 3/738 | 10/20758 | 0.004454 | 0.08969 | 0.08133 | 3 | 0.004065 |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | 12/738 | 142/20758 | 0.004814 | 0.09475 | 0.08592 | 12 | 0.01626 |
GO:0140828 | metal cation:monoatomic cation antiporter activity | 5/738 | 34/20758 | 0.00663 | 0.1276 | 0.1157 | 5 | 0.006775 |
GO:0051139 | metal cation:proton antiporter activity | 4/738 | 22/20758 | 0.006955 | 0.1309 | 0.1187 | 4 | 0.00542 |
GO:0044325 | transmembrane transporter binding | 11/738 | 131/20758 | 0.00712 | 0.1312 | 0.119 | 11 | 0.01491 |
GO:0001786 | phosphatidylserine binding | 7/738 | 64/20758 | 0.007478 | 0.1349 | 0.1223 | 7 | 0.009485 |
GO:0045505 | dynein intermediate chain binding | 5/738 | 37/20758 | 0.00952 | 0.1622 | 0.1471 | 5 | 0.006775 |
GO:0008143 | poly(A) binding | 4/738 | 24/20758 | 0.009552 | 0.1622 | 0.1471 | 4 | 0.00542 |
GO:0030215 | semaphorin receptor binding | 4/738 | 24/20758 | 0.009552 | 0.1622 | 0.1471 | 4 | 0.00542 |
GO:0022843 | voltage-gated cation channel activity | 12/738 | 156/20758 | 0.009962 | 0.1659 | 0.1504 | 12 | 0.01626 |
GO:0004674 | protein serine/threonine kinase activity | 27/738 | 470/20758 | 0.01025 | 0.1675 | 0.1519 | 27 | 0.03659 |
GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | 5/738 | 38/20758 | 0.01065 | 0.1708 | 0.1549 | 5 | 0.006775 |
GO:0097110 | scaffold protein binding | 7/738 | 69/20758 | 0.01116 | 0.1758 | 0.1594 | 7 | 0.009485 |
GO:0051018 | protein kinase A binding | 6/738 | 55/20758 | 0.01307 | 0.2021 | 0.1833 | 6 | 0.00813 |
GO:0030165 | PDZ domain binding | 8/738 | 89/20758 | 0.01385 | 0.21 | 0.1904 | 8 | 0.01084 |
GO:0099604 | ligand-gated calcium channel activity | 4/738 | 27/20758 | 0.01451 | 0.21 | 0.1904 | 4 | 0.00542 |
GO:0004029 | aldehyde dehydrogenase (NAD+) activity | 3/738 | 15/20758 | 0.01479 | 0.21 | 0.1904 | 3 | 0.004065 |
GO:0030553 | cGMP binding | 3/738 | 15/20758 | 0.01479 | 0.21 | 0.1904 | 3 | 0.004065 |
GO:0034236 | protein kinase A catalytic subunit binding | 3/738 | 15/20758 | 0.01479 | 0.21 | 0.1904 | 3 | 0.004065 |
GO:0015079 | potassium ion transmembrane transporter activity | 12/738 | 166/20758 | 0.01571 | 0.2195 | 0.199 | 12 | 0.01626 |
GO:0051117 | ATPase binding | 8/738 | 92/20758 | 0.01666 | 0.229 | 0.2077 | 8 | 0.01084 |
GO:0003953 | NAD+ nucleosidase activity | 3/738 | 16/20758 | 0.01773 | 0.2292 | 0.2078 | 3 | 0.004065 |
GO:0015386 | potassium:proton antiporter activity | 3/738 | 16/20758 | 0.01773 | 0.2292 | 0.2078 | 3 | 0.004065 |
GO:0050135 | NAD(P)+ nucleosidase activity | 3/738 | 16/20758 | 0.01773 | 0.2292 | 0.2078 | 3 | 0.004065 |
GO:0061809 | NAD+ nucleotidase, cyclic ADP-ribose generating | 3/738 | 16/20758 | 0.01773 | 0.2292 | 0.2078 | 3 | 0.004065 |
GO:0004725 | protein tyrosine phosphatase activity | 9/738 | 112/20758 | 0.01845 | 0.2321 | 0.2105 | 9 | 0.0122 |
GO:0034593 | phosphatidylinositol bisphosphate phosphatase activity | 4/738 | 29/20758 | 0.01857 | 0.2321 | 0.2105 | 4 | 0.00542 |
GO:0008081 | phosphoric diester hydrolase activity | 8/738 | 95/20758 | 0.01985 | 0.2321 | 0.2105 | 8 | 0.01084 |
GO:0015276 | ligand-gated ion channel activity | 11/738 | 152/20758 | 0.02006 | 0.2321 | 0.2105 | 11 | 0.01491 |
GO:0022834 | ligand-gated channel activity | 11/738 | 152/20758 | 0.02006 | 0.2321 | 0.2105 | 11 | 0.01491 |
GO:0005244 | voltage-gated ion channel activity | 14/738 | 213/20758 | 0.02042 | 0.2321 | 0.2105 | 14 | 0.01897 |
GO:0022832 | voltage-gated channel activity | 14/738 | 213/20758 | 0.02042 | 0.2321 | 0.2105 | 14 | 0.01897 |
GO:0051393 | alpha-actinin binding | 4/738 | 30/20758 | 0.02084 | 0.2321 | 0.2105 | 4 | 0.00542 |
GO:0070717 | poly-purine tract binding | 4/738 | 30/20758 | 0.02084 | 0.2321 | 0.2105 | 4 | 0.00542 |
GO:0004030 | aldehyde dehydrogenase [NAD(P)+] activity | 3/738 | 17/20758 | 0.02098 | 0.2321 | 0.2105 | 3 | 0.004065 |
GO:0008484 | sulfuric ester hydrolase activity | 3/738 | 17/20758 | 0.02098 | 0.2321 | 0.2105 | 3 | 0.004065 |
GO:0015298 | solute:cation antiporter activity | 5/738 | 45/20758 | 0.02118 | 0.2321 | 0.2105 | 5 | 0.006775 |
GO:0072341 | modified amino acid binding | 8/738 | 97/20758 | 0.02221 | 0.2404 | 0.218 | 8 | 0.01084 |
GO:0017128 | phospholipid scramblase activity | 3/738 | 18/20758 | 0.02452 | 0.2588 | 0.2347 | 3 | 0.004065 |
GO:0030275 | LRR domain binding | 3/738 | 18/20758 | 0.02452 | 0.2588 | 0.2347 | 3 | 0.004065 |
GO:1902936 | phosphatidylinositol bisphosphate binding | 9/738 | 118/20758 | 0.02496 | 0.2588 | 0.2347 | 9 | 0.0122 |
GO:0140303 | intramembrane lipid transporter activity | 5/738 | 47/20758 | 0.0251 | 0.2588 | 0.2347 | 5 | 0.006775 |
GO:0017124 | SH3 domain binding | 10/738 | 139/20758 | 0.02682 | 0.2732 | 0.2478 | 10 | 0.01355 |
GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity | 3/738 | 19/20758 | 0.02837 | 0.2755 | 0.2499 | 3 | 0.004065 |
GO:0030169 | low-density lipoprotein particle binding | 3/738 | 19/20758 | 0.02837 | 0.2755 | 0.2499 | 3 | 0.004065 |
GO:0005154 | epidermal growth factor receptor binding | 4/738 | 33/20758 | 0.02864 | 0.2755 | 0.2499 | 4 | 0.00542 |
GO:0005451 | monovalent cation:proton antiporter activity | 4/738 | 33/20758 | 0.02864 | 0.2755 | 0.2499 | 4 | 0.00542 |
GO:0015299 | solute:proton antiporter activity | 4/738 | 33/20758 | 0.02864 | 0.2755 | 0.2499 | 4 | 0.00542 |
GO:0005249 | voltage-gated potassium channel activity | 8/738 | 102/20758 | 0.02896 | 0.2756 | 0.2499 | 8 | 0.01084 |
GO:0099094 | ligand-gated cation channel activity | 9/738 | 122/20758 | 0.03012 | 0.2835 | 0.2571 | 9 | 0.0122 |
GO:0005548 | phospholipid transporter activity | 6/738 | 67/20758 | 0.03159 | 0.2942 | 0.2667 | 6 | 0.00813 |
GO:0001972 | retinoic acid binding | 3/738 | 20/20758 | 0.03251 | 0.2964 | 0.2687 | 3 | 0.004065 |
GO:0052745 | inositol phosphate phosphatase activity | 3/738 | 20/20758 | 0.03251 | 0.2964 | 0.2687 | 3 | 0.004065 |
GO:0106310 | protein serine kinase activity | 21/738 | 383/20758 | 0.03372 | 0.3042 | 0.2758 | 21 | 0.02846 |
GO:0005251 | delayed rectifier potassium channel activity | 4/738 | 35/20758 | 0.03467 | 0.3096 | 0.2807 | 4 | 0.00542 |
GO:0005267 | potassium channel activity | 9/738 | 126/20758 | 0.03598 | 0.3137 | 0.2845 | 9 | 0.0122 |
GO:0015125 | bile acid transmembrane transporter activity | 3/738 | 21/20758 | 0.03695 | 0.3137 | 0.2845 | 3 | 0.004065 |
GO:0019200 | carbohydrate kinase activity | 3/738 | 21/20758 | 0.03695 | 0.3137 | 0.2845 | 3 | 0.004065 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is negative regulation of natural killer cell activation (1.187899e-09), and the highest (among the lowest 10) is negative regulation of secretion by cell (0.0002284739). The ratio is 192334.51, i.e., they differ in 5 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0032815 | negative regulation of natural killer cell activation | 12/728 | 20/21069 | 2.589e-13 | 1.188e-09 | 1.107e-09 | 12 | 0.01648 |
GO:0043321 | regulation of natural killer cell degranulation | 7/728 | 10/21069 | 6.264e-09 | 9.58e-06 | 8.924e-06 | 7 | 0.009615 |
GO:0043323 | positive regulation of natural killer cell degranulation | 7/728 | 10/21069 | 6.264e-09 | 9.58e-06 | 8.924e-06 | 7 | 0.009615 |
GO:0051048 | negative regulation of secretion | 25/728 | 203/21069 | 3.923e-08 | 4.194e-05 | 3.906e-05 | 25 | 0.03434 |
GO:0010975 | regulation of neuron projection development | 41/728 | 468/21069 | 5.351e-08 | 4.194e-05 | 3.906e-05 | 41 | 0.05632 |
GO:0052695 | cellular glucuronidation | 9/728 | 24/21069 | 5.484e-08 | 4.194e-05 | 3.906e-05 | 9 | 0.01236 |
GO:0032814 | regulation of natural killer cell activation | 13/728 | 59/21069 | 8.398e-08 | 5.505e-05 | 5.127e-05 | 13 | 0.01786 |
GO:0006063 | uronic acid metabolic process | 9/728 | 29/21069 | 3.597e-07 | 0.0001833 | 0.0001708 | 9 | 0.01236 |
GO:0019585 | glucuronate metabolic process | 9/728 | 29/21069 | 3.597e-07 | 0.0001833 | 0.0001708 | 9 | 0.01236 |
GO:1903531 | negative regulation of secretion by cell | 21/728 | 171/21069 | 4.98e-07 | 0.0002285 | 0.0002128 | 21 | 0.02885 |
GO:0043320 | natural killer cell degranulation | 7/728 | 17/21069 | 8.21e-07 | 0.0003424 | 0.000319 | 7 | 0.009615 |
GO:0016358 | dendrite development | 26/728 | 262/21069 | 1.52e-06 | 0.0005811 | 0.0005413 | 26 | 0.03571 |
GO:0045920 | negative regulation of exocytosis | 10/728 | 44/21069 | 1.952e-06 | 0.0006888 | 0.0006417 | 10 | 0.01374 |
GO:0043301 | negative regulation of leukocyte degranulation | 7/728 | 20/21069 | 2.989e-06 | 0.0009794 | 0.0009123 | 7 | 0.009615 |
GO:0002725 | negative regulation of T cell cytokine production | 7/728 | 21/21069 | 4.35e-06 | 0.001286 | 0.001198 | 7 | 0.009615 |
GO:0048813 | dendrite morphogenesis | 18/728 | 150/21069 | 4.486e-06 | 0.001286 | 0.001198 | 18 | 0.02473 |
GO:1903306 | negative regulation of regulated secretory pathway | 8/728 | 31/21069 | 7.616e-06 | 0.002055 | 0.001915 | 8 | 0.01099 |
GO:0051056 | regulation of small GTPase mediated signal transduction | 29/728 | 343/21069 | 9.486e-06 | 0.002418 | 0.002252 | 29 | 0.03984 |
GO:0002477 | antigen processing and presentation of exogenous peptide antigen via MHC class Ib | 7/728 | 24/21069 | 1.183e-05 | 0.002855 | 0.00266 | 7 | 0.009615 |
GO:0032816 | positive regulation of natural killer cell activation | 8/728 | 37/21069 | 3.103e-05 | 0.007118 | 0.00663 | 8 | 0.01099 |
GO:0002475 | antigen processing and presentation via MHC class Ib | 8/728 | 40/21069 | 5.64e-05 | 0.01232 | 0.01148 | 8 | 0.01099 |
GO:0002476 | antigen processing and presentation of endogenous peptide antigen via MHC class Ib | 7/728 | 31/21069 | 7.277e-05 | 0.01452 | 0.01352 | 7 | 0.009615 |
GO:0043302 | positive regulation of leukocyte degranulation | 7/728 | 31/21069 | 7.277e-05 | 0.01452 | 0.01352 | 7 | 0.009615 |
GO:0098742 | cell-cell adhesion via plasma-membrane adhesion molecules | 24/728 | 293/21069 | 8.98e-05 | 0.01717 | 0.01599 | 24 | 0.03297 |
GO:0046580 | negative regulation of Ras protein signal transduction | 9/728 | 55/21069 | 0.0001023 | 0.01877 | 0.01748 | 9 | 0.01236 |
GO:0002428 | antigen processing and presentation of peptide antigen via MHC class Ib | 7/728 | 33/21069 | 0.0001113 | 0.01964 | 0.0183 | 7 | 0.009615 |
GO:0045953 | negative regulation of natural killer cell mediated cytotoxicity | 12/728 | 98/21069 | 0.0001417 | 0.02399 | 0.02234 | 12 | 0.01648 |
GO:0007411 | axon guidance | 21/728 | 248/21069 | 0.0001533 | 0.02399 | 0.02234 | 21 | 0.02885 |
GO:0002716 | negative regulation of natural killer cell mediated immunity | 12/728 | 99/21069 | 0.0001562 | 0.02399 | 0.02234 | 12 | 0.01648 |
GO:0071709 | membrane assembly | 10/728 | 71/21069 | 0.0001568 | 0.02399 | 0.02234 | 10 | 0.01374 |
GO:0097485 | neuron projection guidance | 21/728 | 249/21069 | 0.0001621 | 0.02399 | 0.02235 | 21 | 0.02885 |
GO:0007409 | axonogenesis | 32/728 | 468/21069 | 0.0002088 | 0.02903 | 0.02704 | 32 | 0.04396 |
GO:0007158 | neuron cell-cell adhesion | 5/728 | 17/21069 | 0.0002127 | 0.02903 | 0.02704 | 5 | 0.006868 |
GO:0046578 | regulation of Ras protein signal transduction | 19/728 | 218/21069 | 0.0002151 | 0.02903 | 0.02704 | 19 | 0.0261 |
GO:0050770 | regulation of axonogenesis | 16/728 | 168/21069 | 0.0002456 | 0.03096 | 0.02884 | 16 | 0.02198 |
GO:0044091 | membrane biogenesis | 10/728 | 75/21069 | 0.0002488 | 0.03096 | 0.02884 | 10 | 0.01374 |
GO:0010727 | negative regulation of hydrogen peroxide metabolic process | 4/728 | 10/21069 | 0.0002513 | 0.03096 | 0.02884 | 4 | 0.005495 |
GO:0007605 | sensory perception of sound | 16/728 | 169/21069 | 0.0002627 | 0.03096 | 0.02884 | 16 | 0.02198 |
GO:0051058 | negative regulation of small GTPase mediated signal transduction | 9/728 | 62/21069 | 0.0002632 | 0.03096 | 0.02884 | 9 | 0.01236 |
GO:0001911 | negative regulation of leukocyte mediated cytotoxicity | 12/728 | 105/21069 | 0.0002733 | 0.03135 | 0.0292 | 12 | 0.01648 |
GO:0030101 | natural killer cell activation | 15/728 | 155/21069 | 0.0003196 | 0.03576 | 0.03331 | 15 | 0.0206 |
GO:0031342 | negative regulation of cell killing | 12/728 | 108/21069 | 0.0003555 | 0.03844 | 0.03581 | 12 | 0.01648 |
GO:0045921 | positive regulation of exocytosis | 11/728 | 93/21069 | 0.0003607 | 0.03844 | 0.03581 | 11 | 0.01511 |
GO:0060537 | muscle tissue development | 30/728 | 442/21069 | 0.0003686 | 0.03844 | 0.03581 | 30 | 0.04121 |
GO:0002323 | natural killer cell activation involved in immune response | 7/728 | 40/21069 | 0.0003939 | 0.03954 | 0.03683 | 7 | 0.009615 |
GO:0051250 | negative regulation of lymphocyte activation | 19/728 | 229/21069 | 0.000401 | 0.03954 | 0.03683 | 19 | 0.0261 |
GO:0009100 | glycoprotein metabolic process | 29/728 | 424/21069 | 0.0004051 | 0.03954 | 0.03683 | 29 | 0.03984 |
GO:0017157 | regulation of exocytosis | 19/728 | 230/21069 | 0.0004233 | 0.04046 | 0.03769 | 19 | 0.0261 |
GO:0050954 | sensory perception of mechanical stimulus | 17/728 | 197/21069 | 0.0005086 | 0.04762 | 0.04436 | 17 | 0.02335 |
GO:0010728 | regulation of hydrogen peroxide biosynthetic process | 4/728 | 12/21069 | 0.0005606 | 0.05043 | 0.04697 | 4 | 0.005495 |
GO:0097105 | presynaptic membrane assembly | 4/728 | 12/21069 | 0.0005606 | 0.05043 | 0.04697 | 4 | 0.005495 |
GO:0001913 | T cell mediated cytotoxicity | 12/728 | 115/21069 | 0.0006316 | 0.05346 | 0.04979 | 12 | 0.01648 |
GO:0007018 | microtubule-based movement | 29/728 | 436/21069 | 0.000634 | 0.05346 | 0.04979 | 29 | 0.03984 |
GO:0002369 | T cell cytokine production | 8/728 | 56/21069 | 0.0006408 | 0.05346 | 0.04979 | 8 | 0.01099 |
GO:0002724 | regulation of T cell cytokine production | 8/728 | 56/21069 | 0.0006408 | 0.05346 | 0.04979 | 8 | 0.01099 |
GO:0099068 | postsynapse assembly | 6/728 | 32/21069 | 0.0007005 | 0.05624 | 0.05239 | 6 | 0.008242 |
GO:0002486 | antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent | 7/728 | 44/21069 | 0.0007184 | 0.05624 | 0.05239 | 7 | 0.009615 |
GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules | 8/728 | 57/21069 | 0.0007232 | 0.05624 | 0.05239 | 8 | 0.01099 |
GO:0071320 | cellular response to cAMP | 8/728 | 57/21069 | 0.0007232 | 0.05624 | 0.05239 | 8 | 0.01099 |
GO:0051549 | positive regulation of keratinocyte migration | 4/728 | 13/21069 | 0.0007876 | 0.05829 | 0.05429 | 4 | 0.005495 |
GO:0097090 | presynaptic membrane organization | 4/728 | 13/21069 | 0.0007876 | 0.05829 | 0.05429 | 4 | 0.005495 |
GO:0099150 | regulation of postsynaptic specialization assembly | 4/728 | 13/21069 | 0.0007876 | 0.05829 | 0.05429 | 4 | 0.005495 |
GO:1903307 | positive regulation of regulated secretory pathway | 8/728 | 58/21069 | 0.0008139 | 0.05914 | 0.05509 | 8 | 0.01099 |
GO:0002695 | negative regulation of leukocyte activation | 20/728 | 262/21069 | 0.0008249 | 0.05914 | 0.05509 | 20 | 0.02747 |
GO:0060249 | anatomical structure homeostasis | 25/728 | 362/21069 | 0.0008627 | 0.06054 | 0.05639 | 25 | 0.03434 |
GO:0043087 | regulation of GTPase activity | 28/728 | 424/21069 | 0.0008709 | 0.06054 | 0.05639 | 28 | 0.03846 |
GO:0002347 | response to tumor cell | 8/728 | 59/21069 | 0.0009136 | 0.06256 | 0.05827 | 8 | 0.01099 |
GO:0034329 | cell junction assembly | 30/728 | 468/21069 | 0.000933 | 0.06285 | 0.05855 | 30 | 0.04121 |
GO:0045954 | positive regulation of natural killer cell mediated cytotoxicity | 7/728 | 46/21069 | 0.0009453 | 0.06285 | 0.05855 | 7 | 0.009615 |
GO:0050866 | negative regulation of cell activation | 21/728 | 285/21069 | 0.0009726 | 0.06292 | 0.05861 | 21 | 0.02885 |
GO:0098698 | postsynaptic specialization assembly | 5/728 | 23/21069 | 0.0009736 | 0.06292 | 0.05861 | 5 | 0.006868 |
GO:0045824 | negative regulation of innate immune response | 14/728 | 156/21069 | 0.001056 | 0.06663 | 0.06207 | 14 | 0.01923 |
GO:0007019 | microtubule depolymerization | 7/728 | 47/21069 | 0.001078 | 0.06663 | 0.06207 | 7 | 0.009615 |
GO:0060119 | inner ear receptor cell development | 7/728 | 47/21069 | 0.001078 | 0.06663 | 0.06207 | 7 | 0.009615 |
GO:0014706 | striated muscle tissue development | 20/728 | 268/21069 | 0.001089 | 0.06663 | 0.06207 | 20 | 0.02747 |
GO:0060117 | auditory receptor cell development | 5/728 | 24/21069 | 0.001195 | 0.07215 | 0.06721 | 5 | 0.006868 |
GO:0048738 | cardiac muscle tissue development | 19/728 | 251/21069 | 0.001215 | 0.07241 | 0.06745 | 19 | 0.0261 |
GO:0051047 | positive regulation of secretion | 23/728 | 333/21069 | 0.001362 | 0.08012 | 0.07463 | 23 | 0.03159 |
GO:0002710 | negative regulation of T cell mediated immunity | 7/728 | 49/21069 | 0.001387 | 0.08057 | 0.07505 | 7 | 0.009615 |
GO:0060986 | endocrine hormone secretion | 8/728 | 63/21069 | 0.001414 | 0.0806 | 0.07508 | 8 | 0.01099 |
GO:0009812 | flavonoid metabolic process | 4/728 | 15/21069 | 0.001423 | 0.0806 | 0.07508 | 4 | 0.005495 |
GO:0006949 | syncytium formation | 9/728 | 78/21069 | 0.00145 | 0.08115 | 0.07559 | 9 | 0.01236 |
GO:0006887 | exocytosis | 26/728 | 397/21069 | 0.001473 | 0.0813 | 0.07573 | 26 | 0.03571 |
GO:0046545 | development of primary female sexual characteristics | 11/728 | 110/21069 | 0.001489 | 0.0813 | 0.07573 | 11 | 0.01511 |
GO:0046660 | female sex differentiation | 12/728 | 127/21069 | 0.001515 | 0.08176 | 0.07616 | 12 | 0.01648 |
GO:0019835 | cytolysis | 6/728 | 37/21069 | 0.001552 | 0.08258 | 0.07692 | 6 | 0.008242 |
GO:0008038 | neuron recognition | 7/728 | 50/21069 | 0.001566 | 0.08258 | 0.07692 | 7 | 0.009615 |
GO:0071466 | cellular response to xenobiotic stimulus | 16/728 | 200/21069 | 0.001635 | 0.08439 | 0.07861 | 16 | 0.02198 |
GO:0006029 | proteoglycan metabolic process | 10/728 | 95/21069 | 0.001637 | 0.08439 | 0.07861 | 10 | 0.01374 |
GO:0014074 | response to purine-containing compound | 13/728 | 146/21069 | 0.001688 | 0.08605 | 0.08016 | 13 | 0.01786 |
GO:0002028 | regulation of sodium ion transport | 10/728 | 96/21069 | 0.001772 | 0.08934 | 0.08322 | 10 | 0.01374 |
GO:0051547 | regulation of keratinocyte migration | 4/728 | 16/21069 | 0.001846 | 0.09126 | 0.08501 | 4 | 0.005495 |
GO:0035249 | synaptic transmission, glutamatergic | 11/728 | 113/21069 | 0.00185 | 0.09126 | 0.08501 | 11 | 0.01511 |
GO:0010634 | positive regulation of epithelial cell migration | 15/728 | 184/21069 | 0.001875 | 0.09151 | 0.08524 | 15 | 0.0206 |
GO:0002484 | antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway | 7/728 | 52/21069 | 0.001976 | 0.09445 | 0.08798 | 7 | 0.009615 |
GO:0051489 | regulation of filopodium assembly | 7/728 | 52/21069 | 0.001976 | 0.09445 | 0.08798 | 7 | 0.009615 |
GO:0099175 | regulation of postsynapse organization | 10/728 | 98/21069 | 0.002069 | 0.09693 | 0.09029 | 10 | 0.01374 |
GO:0001894 | tissue homeostasis | 21/728 | 303/21069 | 0.00207 | 0.09693 | 0.09029 | 21 | 0.02885 |
GO:0099054 | presynapse assembly | 7/728 | 53/21069 | 0.00221 | 0.1024 | 0.09542 | 7 | 0.009615 |
GO:0070593 | dendrite self-avoidance | 4/728 | 17/21069 | 0.002348 | 0.1077 | 0.1004 | 4 | 0.005495 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is MHC class Ib protein complex (7.090689e-05), and the highest (among the lowest 10) is catenin complex (0.004081384). The ratio is 57.55976, i.e., they differ in 1 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0032398 | MHC class Ib protein complex | 7/755 | 14/22283 | 1.39e-07 | 7.091e-05 | 6.366e-05 | 7 | 0.009272 |
GO:0016010 | dystrophin-associated glycoprotein complex | 7/755 | 20/22283 | 2.628e-06 | 0.0004887 | 0.0004388 | 7 | 0.009272 |
GO:0098984 | neuron to neuron synapse | 32/755 | 383/22283 | 2.875e-06 | 0.0004887 | 0.0004388 | 32 | 0.04238 |
GO:0042383 | sarcolemma | 17/755 | 147/22283 | 1.052e-05 | 0.001206 | 0.001083 | 17 | 0.02252 |
GO:0090665 | glycoprotein complex | 7/755 | 25/22283 | 1.405e-05 | 0.001206 | 0.001083 | 7 | 0.009272 |
GO:0032279 | asymmetric synapse | 29/755 | 357/22283 | 1.419e-05 | 0.001206 | 0.001083 | 29 | 0.03841 |
GO:0014069 | postsynaptic density | 28/755 | 351/22283 | 2.756e-05 | 0.002008 | 0.001803 | 28 | 0.03709 |
GO:0099572 | postsynaptic specialization | 29/755 | 374/22283 | 3.358e-05 | 0.002141 | 0.001922 | 29 | 0.03841 |
GO:0005938 | cell cortex | 26/755 | 326/22283 | 5.295e-05 | 0.003 | 0.002694 | 26 | 0.03444 |
GO:0016342 | catenin complex | 7/755 | 32/22283 | 8.003e-05 | 0.004081 | 0.003664 | 7 | 0.009272 |
GO:0005858 | axonemal dynein complex | 6/755 | 24/22283 | 0.0001183 | 0.005486 | 0.004926 | 6 | 0.007947 |
GO:0098858 | actin-based cell projection | 21/755 | 253/22283 | 0.0001557 | 0.006616 | 0.00594 | 21 | 0.02781 |
GO:0030863 | cortical cytoskeleton | 13/755 | 120/22283 | 0.0002186 | 0.008576 | 0.0077 | 13 | 0.01722 |
GO:0030864 | cortical actin cytoskeleton | 11/755 | 92/22283 | 0.0002783 | 0.01014 | 0.009104 | 11 | 0.01457 |
GO:0036157 | outer dynein arm | 4/755 | 11/22283 | 0.0003567 | 0.01176 | 0.01056 | 4 | 0.005298 |
GO:0032421 | stereocilium bundle | 9/755 | 66/22283 | 0.0003689 | 0.01176 | 0.01056 | 9 | 0.01192 |
GO:0030175 | filopodium | 13/755 | 128/22283 | 0.0004129 | 0.01224 | 0.01099 | 13 | 0.01722 |
GO:0019897 | extrinsic component of plasma membrane | 16/755 | 180/22283 | 0.0004319 | 0.01224 | 0.01099 | 16 | 0.02119 |
GO:0032420 | stereocilium | 8/755 | 57/22283 | 0.0006371 | 0.0171 | 0.01535 | 8 | 0.0106 |
GO:0042612 | MHC class I protein complex | 7/755 | 46/22283 | 0.0008437 | 0.02151 | 0.01932 | 7 | 0.009272 |
GO:0055038 | recycling endosome membrane | 12/755 | 138/22283 | 0.002605 | 0.06326 | 0.05679 | 12 | 0.01589 |
GO:0097060 | synaptic membrane | 25/755 | 408/22283 | 0.003372 | 0.07817 | 0.07019 | 25 | 0.03311 |
GO:0031252 | cell leading edge | 27/755 | 457/22283 | 0.003898 | 0.08643 | 0.0776 | 27 | 0.03576 |
GO:1990752 | microtubule end | 5/755 | 33/22283 | 0.00476 | 0.1011 | 0.09081 | 5 | 0.006623 |
GO:0099568 | cytoplasmic region | 19/755 | 294/22283 | 0.005682 | 0.1159 | 0.1041 | 19 | 0.02517 |
GO:0055037 | recycling endosome | 17/755 | 254/22283 | 0.006151 | 0.1207 | 0.1083 | 17 | 0.02252 |
GO:0034703 | cation channel complex | 16/755 | 236/22283 | 0.006856 | 0.1289 | 0.1157 | 16 | 0.02119 |
GO:0031256 | leading edge membrane | 14/755 | 196/22283 | 0.007114 | 0.1289 | 0.1157 | 14 | 0.01854 |
GO:0034702 | ion channel complex | 20/755 | 323/22283 | 0.00733 | 0.1289 | 0.1157 | 20 | 0.02649 |
GO:0098978 | glutamatergic synapse | 21/755 | 354/22283 | 0.009699 | 0.1635 | 0.1468 | 21 | 0.02781 |
GO:0032587 | ruffle membrane | 9/755 | 106/22283 | 0.009938 | 0.1635 | 0.1468 | 9 | 0.01192 |
GO:0030286 | dynein complex | 6/755 | 56/22283 | 0.01143 | 0.1822 | 0.1636 | 6 | 0.007947 |
GO:0044304 | main axon | 7/755 | 74/22283 | 0.01259 | 0.1946 | 0.1747 | 7 | 0.009272 |
GO:0044753 | amphisome | 3/755 | 15/22283 | 0.013 | 0.195 | 0.1751 | 3 | 0.003974 |
GO:0032838 | plasma membrane bounded cell projection cytoplasm | 16/755 | 255/22283 | 0.01372 | 0.2 | 0.1795 | 16 | 0.02119 |
GO:0034705 | potassium channel complex | 8/755 | 94/22283 | 0.01446 | 0.2049 | 0.1839 | 8 | 0.0106 |
GO:0043034 | costamere | 3/755 | 16/22283 | 0.0156 | 0.2124 | 0.1907 | 3 | 0.003974 |
GO:0005912 | adherens junction | 13/755 | 195/22283 | 0.01583 | 0.2124 | 0.1907 | 13 | 0.01722 |
GO:0030055 | cell-substrate junction | 26/755 | 493/22283 | 0.01799 | 0.2298 | 0.2063 | 26 | 0.03444 |
GO:0097730 | non-motile cilium | 12/755 | 178/22283 | 0.01844 | 0.2298 | 0.2063 | 12 | 0.01589 |
GO:0098688 | parallel fiber to Purkinje cell synapse | 3/755 | 17/22283 | 0.01848 | 0.2298 | 0.2063 | 3 | 0.003974 |
GO:0098562 | cytoplasmic side of membrane | 14/755 | 222/22283 | 0.0195 | 0.2298 | 0.2063 | 14 | 0.01854 |
GO:0019898 | extrinsic component of membrane | 19/755 | 335/22283 | 0.02051 | 0.2298 | 0.2063 | 19 | 0.02517 |
GO:0097731 | 9+0 non-motile cilium | 10/755 | 140/22283 | 0.02098 | 0.2298 | 0.2063 | 10 | 0.01325 |
GO:0030016 | myofibril | 15/755 | 246/22283 | 0.02099 | 0.2298 | 0.2063 | 15 | 0.01987 |
GO:0005930 | axoneme | 11/755 | 161/22283 | 0.02146 | 0.2298 | 0.2063 | 11 | 0.01457 |
GO:0032045 | guanyl-nucleotide exchange factor complex | 3/755 | 18/22283 | 0.02163 | 0.2298 | 0.2063 | 3 | 0.003974 |
GO:0044305 | calyx of Held | 3/755 | 18/22283 | 0.02163 | 0.2298 | 0.2063 | 3 | 0.003974 |
GO:0097014 | ciliary plasm | 11/755 | 162/22283 | 0.02234 | 0.2325 | 0.2088 | 11 | 0.01457 |
GO:0008076 | voltage-gated potassium channel complex | 7/755 | 84/22283 | 0.0238 | 0.2428 | 0.218 | 7 | 0.009272 |
GO:0043204 | perikaryon | 11/755 | 168/22283 | 0.02824 | 0.2766 | 0.2483 | 11 | 0.01457 |
GO:0043292 | contractile fiber | 15/755 | 256/22283 | 0.02864 | 0.2766 | 0.2483 | 15 | 0.01987 |
GO:0005828 | kinetochore microtubule | 3/755 | 20/22283 | 0.02874 | 0.2766 | 0.2483 | 3 | 0.003974 |
GO:0032426 | stereocilium tip | 3/755 | 21/22283 | 0.03271 | 0.2861 | 0.2569 | 3 | 0.003974 |
GO:0098862 | cluster of actin-based cell projections | 11/755 | 172/22283 | 0.03274 | 0.2861 | 0.2569 | 11 | 0.01457 |
GO:0030672 | synaptic vesicle membrane | 9/755 | 130/22283 | 0.03294 | 0.2861 | 0.2569 | 9 | 0.01192 |
GO:0099501 | exocytic vesicle membrane | 9/755 | 130/22283 | 0.03294 | 0.2861 | 0.2569 | 9 | 0.01192 |
GO:0031594 | neuromuscular junction | 6/755 | 71/22283 | 0.03309 | 0.2861 | 0.2569 | 6 | 0.007947 |
GO:0001726 | ruffle | 12/755 | 194/22283 | 0.0331 | 0.2861 | 0.2569 | 12 | 0.01589 |
GO:0001917 | photoreceptor inner segment | 6/755 | 72/22283 | 0.0351 | 0.2977 | 0.2673 | 6 | 0.007947 |
GO:0030315 | T-tubule | 5/755 | 54/22283 | 0.03561 | 0.2977 | 0.2673 | 5 | 0.006623 |
GO:0150034 | distal axon | 16/755 | 290/22283 | 0.03912 | 0.3102 | 0.2785 | 16 | 0.02119 |
GO:0032154 | cleavage furrow | 5/755 | 56/22283 | 0.04074 | 0.3102 | 0.2785 | 5 | 0.006623 |
GO:0060076 | excitatory synapse | 5/755 | 56/22283 | 0.04074 | 0.3102 | 0.2785 | 5 | 0.006623 |
GO:0035371 | microtubule plus-end | 3/755 | 23/22283 | 0.04145 | 0.3102 | 0.2785 | 3 | 0.003974 |
GO:0099240 | intrinsic component of synaptic membrane | 11/755 | 179/22283 | 0.0418 | 0.3102 | 0.2785 | 11 | 0.01457 |
GO:0032437 | cuticular plate | 2/755 | 10/22283 | 0.04308 | 0.3102 | 0.2785 | 2 | 0.002649 |
GO:0098981 | cholinergic synapse | 2/755 | 10/22283 | 0.04308 | 0.3102 | 0.2785 | 2 | 0.002649 |
GO:0044306 | neuron projection terminus | 9/755 | 137/22283 | 0.04372 | 0.3102 | 0.2785 | 9 | 0.01192 |
GO:0035097 | histone methyltransferase complex | 6/755 | 76/22283 | 0.04394 | 0.3102 | 0.2785 | 6 | 0.007947 |
GO:0045211 | postsynaptic membrane | 16/755 | 296/22283 | 0.04564 | 0.3102 | 0.2785 | 16 | 0.02119 |
GO:0030017 | sarcomere | 13/755 | 227/22283 | 0.04619 | 0.3102 | 0.2785 | 13 | 0.01722 |
GO:0032433 | filopodium tip | 3/755 | 24/22283 | 0.04622 | 0.3102 | 0.2785 | 3 | 0.003974 |
GO:0030018 | Z disc | 9/755 | 139/22283 | 0.04719 | 0.3102 | 0.2785 | 9 | 0.01192 |
GO:0032153 | cell division site | 6/755 | 78/22283 | 0.04884 | 0.3102 | 0.2785 | 6 | 0.007947 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
No significant results were found in DO.
No significant results were found in NCG.